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JSantini_Fe4_scaffold_91

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe4_scaffold_91_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(429..2747)
DNA (2319bp) protein (773aa)
von Willebrand factor type A
von Willebrand factor type A n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNK3_9GAMM
von Willebrand factor type A {ECO:0000313|EMBL:AEM48342.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_91_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2799..3602)
DNA (804bp) protein (268aa)
cbbQ-1; CbbQ protein
CbbQ/NirQ/NorQ domain protein n=4 Tax=root RepID=B5EQF9_ACIF5
Post-translational RubisCO activator CbbQ {ECO:0000313|EMBL:CDQ12189.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_91_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3759..4115)
DNA (357bp) protein (119aa)
ribulose bisphosphate carboxylase small chain
Ribulose bisphosphate carboxylase small chain n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNK5_9GAMM
Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RubisCO) {ECO:0000313|EMBL:CDQ12188.1}; EC=4.1.1.39 {ECO:0000313|EMBL:CDQ12188.1};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_91_4
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4193..5614)
DNA (1422bp) protein (474aa)
ribulose bisphosphate carboxylase large chain
Ribulose bisphosphate carboxylase large chain n=4 Tax=Bacteria RepID=G0JNK6_9GAMM
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_91_5
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5966..8707
DNA (2742bp) protein (914aa)
Extracellular Matrix protein PelA
Uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTH3_9GAMM
Extracellular Matrix protein PelA {ECO:0000313|EMBL:AIA53928.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
JSantini_Fe4_scaffold_91_6
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8685..9527
DNA (843bp) protein (281aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Acidithiobacillus caldus RepID=C6NTH4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AEK56693.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_Fe4_scaffold_91_7
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9524..11176
DNA (1653bp) protein (551aa)
hypothetical protein
TPR repeat-containing protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTH5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AIA53930.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
JSantini_Fe4_scaffold_91_8
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11151..12623
DNA (1473bp) protein (491aa)
TPR repeat-containing protein
TPR repeat-containing protein n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZT97_ACICS
TPR repeat-containing protein {ECO:0000313|EMBL:AEK56695.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_Fe4_scaffold_91_9
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12636..13166
DNA (531bp) protein (177aa)
lipoprotein
Putative lipoprotein n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZT98_ACICS
Putative lipoprotein {ECO:0000313|EMBL:AEK56696.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_Fe4_scaffold_91_10
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13163..14443
DNA (1281bp) protein (427aa)
transmembrane protein
transmembrane protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625415
Putative transmembrane protein {ECO:0000313|EMBL:AEK56697.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_Fe4_scaffold_91_11
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14440..15363
DNA (924bp) protein (308aa)
Extracellular Matrix protein PelE
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625416
Extracellular Matrix protein PelE {ECO:0000313|EMBL:AIA53934.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
JSantini_Fe4_scaffold_91_12
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15360..16871
DNA (1512bp) protein (504aa)
glycosyl transferase family protein
glycosyl transferase family 1 n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625417
Glycosyl transferase, group 1 {ECO:0000313|EMBL:AEK56699.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_Fe4_scaffold_91_13
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16859..18238
DNA (1380bp) protein (460aa)
Extracellular Matrix protein PelG
Probable transmembrane protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTI1_9GAMM
Extracellular Matrix protein PelG {ECO:0000313|EMBL:AIA53936.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
JSantini_Fe4_scaffold_91_14
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18279..19217
DNA (939bp) protein (313aa)
UDP-glucose 4-epimerase
UDP-glucose 4-epimerase n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZT75_ACICS
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AEK56701.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_Fe4_scaffold_91_15
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19345..20898
DNA (1554bp) protein (518aa)
mviN; integral membrane protein MviN
Integral membrane protein MviN n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EN35_ACIF5
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_91_16

Not on your lists

20891..21328
DNA (438bp) protein (146aa)
hypothetical protein
Uncharacterized protein n=3 Tax=root RepID=E6QDT5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI05361.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_91_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21393..22325
DNA (933bp) protein (311aa)
riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNN8_9GAMM
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_91_18
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22328..25141
DNA (2814bp) protein (938aa)
Isoleucyl-tRNA synthetase
Isoleucine--tRNA ligase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNN9_9GAMM
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_91_19
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25141..25599
DNA (459bp) protein (153aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNP0_9GAMM
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_91_20
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25763..26053
DNA (291bp) protein (97aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNP1_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM48380.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_91_21
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26069..26677)
DNA (609bp) protein (203aa)
hypothetical protein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625273
Uncharacterized protein {ECO:0000313|EMBL:AEK58386.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_Fe4_scaffold_91_22
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26708..27454)
DNA (747bp) protein (249aa)
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNP2_9GAMM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEM48381.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_91_23
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27451..28026)
DNA (576bp) protein (192aa)
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNP3_9GAMM
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEM48382.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_91_24
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28098..29861)
DNA (1764bp) protein (588aa)
ABC transporter
ABC transporter domain-containing protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNP4_9GAMM
ABC transporter domain-containing protein {ECO:0000313|EMBL:CDQ11840.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_91_25
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29988..30464
DNA (477bp) protein (159aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNP5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM48384.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_91_26
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30449..31276)
DNA (828bp) protein (276aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNP6_9GAMM
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:AEM48385.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_91_27
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31273..34956)
DNA (3684bp) protein (1228aa)
membrane protein
Membrane protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNP7_9GAMM
Membrane protein {ECO:0000313|EMBL:CDQ11843.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_91_28
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35217..38081
DNA (2865bp) protein (955aa)
glutamate-ammonia-ligase adenylyltransferase
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNP8_9GAMM
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_91_29
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38094..39017
DNA (924bp) protein (308aa)
branched-chain amino acid aminotransferase
Branched-chain amino acid aminotransferase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNP9_9GAMM
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AEM48388.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_91_30
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39255..41039)
DNA (1785bp) protein (595aa)
thiol:disulfide interchange protein dsbD
Thiol:disulfide interchange protein DsbD n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNQ1_9GAMM
Thiol:disulfide interchange protein DsbD {ECO:0000256|HAMAP-Rule:MF_00399}; EC=1.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00399};; Protein-disulfide reductase {ECO:0000256|HAMAP-Rule:MF_00399}; Flags: Precursor;; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
Displaying items 1-30 of 32 in total

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