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JSantini_Fe4_scaffold_177

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe4_scaffold_177_1
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1440)
DNA (1440bp) protein (480aa)
h16_A0978; hypothetical protein
hypothetical protein n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI000376AC7A
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
JSantini_Fe4_scaffold_177_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1472..1759)
DNA (288bp) protein (96aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V218_VARPE
Uncharacterized protein {ECO:0000313|EMBL:ADU39097.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
JSantini_Fe4_scaffold_177_3
Marinobacter algicola, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2138..2629
DNA (492bp) protein (164aa)
hypothetical protein
Type II secretory pathway, pseudopilin PulG n=1 Tax=Marinobacter algicola DG893 RepID=A6F132_9ALTE
Type II secretory pathway, pseudopilin PulG {ECO:0000313|EMBL:EDM47481.1}; TaxID=443152 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter algicola DG893.;"
JSantini_Fe4_scaffold_177_4

Not on your lists

2648..3553
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QDH4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI05250.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_177_5

Not on your lists

3535..3945
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QDH3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI05249.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_177_6
unknown

Not on your lists

4055..5539
DNA (1485bp) protein (495aa)

This feature has no annotations

JSantini_Fe4_scaffold_177_7

Not on your lists

comp(5580..6476)
DNA (897bp) protein (299aa)
hypothetical protein
Major facilitator superfamily MFS_1 (Fragment) n=1 Tax=mine drainage metagenome RepID=T1D7E4_9ZZZZ
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EQD77359.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_177_8
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6482..7231)
DNA (750bp) protein (250aa)
metallo-beta-lactamase family protein
Metallo-beta-lactamase family protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNA9_9GAMM
Protein ETHE1, mitochondrial {ECO:0000313|EMBL:CDQ12210.1}; EC=3.-.-.- {ECO:0000313|EMBL:CDQ12210.1};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_177_9
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7471..8373
DNA (903bp) protein (301aa)
alpha/beta hydrolase fold domain-containing protein
Alpha/beta hydrolase fold containing protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL65_9GAMM
Alpha/beta hydrolase fold containing protein {ECO:0000313|EMBL:AEM49180.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_177_10
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8476..9009
DNA (534bp) protein (178aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Acidithiobacillus RepID=B7JBK3_ACIF2
Uncharacterized protein {ECO:0000313|EMBL:ACK78940.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_177_11
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9089..9400)
DNA (312bp) protein (104aa)
MerR family transcriptional regulator
MerR family transcriptional regulator n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL63_9GAMM
MerR family transcriptional regulator {ECO:0000313|EMBL:AEM49178.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_177_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9425..10378)
DNA (954bp) protein (318aa)
chaperone DnaJ domain-containing protein
Chaperone DnaJ domain protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL62_9GAMM
Chaperone DnaJ domain protein {ECO:0000313|EMBL:AEM49177.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_177_13
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10494..12623
DNA (2130bp) protein (710aa)
UvrD/REP helicase
UvrD/REP helicase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL61_9GAMM
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_177_14
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12641..13063
DNA (423bp) protein (141aa)
competence protein ComEA helix-hairpin-helix repeat-containing protein
Competence protein ComEA helix-hairpin-helix repeat protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL60_9GAMM
Competence protein ComEA helix-hairpin-helix repeat protein {ECO:0000313|EMBL:CDQ09080.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_177_15
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13228..14160)
DNA (933bp) protein (311aa)
homoserine kinase
Homoserine kinase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL59_9GAMM
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_177_16
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14204..14539)
DNA (336bp) protein (112aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL58_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM49173.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_177_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14559..15278)
DNA (720bp) protein (240aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL57_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDQ09083.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_177_18
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15348..18047
DNA (2700bp) protein (900aa)
DNA polymerase I
DNA polymerase I n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL56_9GAMM
DNA polymerase I (POL I) {ECO:0000313|EMBL:CDQ09084.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDQ09084.1};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_177_19
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18050..19312)
DNA (1263bp) protein (421aa)
Ion transport 2 domain-containing protein
Ion transport 2 domain protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL55_9GAMM
Ion transport 2 domain protein {ECO:0000313|EMBL:AEM49170.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_177_20
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19378..20064)
DNA (687bp) protein (229aa)
GTP-binding protein engB
Probable GTP-binding protein EngB n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL54_9GAMM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_177_21
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20179..21381)
DNA (1203bp) protein (401aa)
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL53_9GAMM
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEM49168.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_177_22
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21397..21780)
DNA (384bp) protein (128aa)
aspartate 1-decarboxylase
Aspartate 1-decarboxylase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL52_9GAMM
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_177_23
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22021..24315
DNA (2295bp) protein (765aa)
P-type HAD superfamily ATPase
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL50_9GAMM
Putative Proton-exporting ATPase {ECO:0000313|EMBL:CDQ09090.1}; EC=3.6.3.6 {ECO:0000313|EMBL:CDQ09090.1};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_177_24
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24378..24980
DNA (603bp) protein (201aa)
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=4 Tax=root RepID=B7JAI9_ACIF2
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
Displaying 24 items

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