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JSantini_Fe4_scaffold_217

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe4_scaffold_217_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..467
DNA (465bp) protein (155aa)
enolase
Enolase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM34_9GAMM
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_217_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

490..1494
DNA (1005bp) protein (335aa)
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM33_9GAMM
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:AEM46983.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_217_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1508..4033
DNA (2526bp) protein (842aa)
alpha-glucan phosphorylase
Alpha-glucan phosphorylase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM90_9GAMM
Alpha-glucan phosphorylase {ECO:0000313|EMBL:CDQ12388.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_217_4

Not on your lists

4046..4603
DNA (558bp) protein (186aa)
hypothetical protein
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QBV0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI04676.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_217_5
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4772..5044
DNA (273bp) protein (91aa)
hypothetical protein
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QBV2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDQ12378.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_217_6
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5167..5427
DNA (261bp) protein (87aa)
transglycosylase-associated protein
Transglycosylase-associated protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM95_9GAMM
Transglycosylase-associated protein {ECO:0000313|EMBL:AEM48145.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_217_7
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5584..6243)
DNA (660bp) protein (220aa)
HhH-GPD family protein
Endonuclease III n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM96_9GAMM
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_217_8
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6253..7131)
DNA (879bp) protein (293aa)
pseudouridine synthase Rsu
Pseudouridine synthase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM97_9GAMM
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_217_9
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7257..8561)
DNA (1305bp) protein (435aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM98_9GAMM
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEM48148.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_217_10
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8754..9257)
DNA (504bp) protein (168aa)
chromosome segregation and condensation protein ScpB
Chromosome segregation and condensation protein, ScpB n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM99_9GAMM
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_217_11
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9250..10083)
DNA (834bp) protein (278aa)
chromosome segregation and condensation protein ScpA
Chromosome segregation and condensation protein ScpA n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMA0_9GAMM
Segregation and condensation protein A {ECO:0000313|EMBL:CDQ12373.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_217_12

Not on your lists

comp(10064..11275)
DNA (1212bp) protein (404aa)
tryptophanyl-tRNA synthetase
Putative Tryptophanyl-tRNA synthetase n=1 Tax=mine drainage metagenome RepID=E6QBW0_9ZZZZ
Putative Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:CBI04686.1}; EC=6.1.1.2 {ECO:0000313|EMBL:CBI04686.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_217_13
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11275..11934)
DNA (660bp) protein (220aa)
peptidase M50
Peptidase M50 n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMA2_9GAMM
Putative Peptidase, M50 family {ECO:0000313|EMBL:CDQ12371.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_217_14
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11984..12619)
DNA (636bp) protein (212aa)
Sua5/YciO/YrdC/YwlC family protein
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMA3_9GAMM
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:AEM48153.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_217_15
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12680..13369
DNA (690bp) protein (230aa)
Queuosine Biosynthesis QueC ATPase
Archaeosine biosynthesis protein queC n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026254B3
7-cyano-7-deazaguanine synthase {ECO:0000256|SAAS:SAAS00029421}; EC=6.3.4.20 {ECO:0000256|SAAS:SAAS00029421};; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_Fe4_scaffold_217_16
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13408..14232
DNA (825bp) protein (275aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMA4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDQ12369.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_217_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14268..14540)
DNA (273bp) protein (91aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMA5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM48155.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_217_18
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14600..14884)
DNA (285bp) protein (95aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMA6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDQ12367.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_217_19
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15275..17623
DNA (2349bp) protein (783aa)
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMA7_9GAMM
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:AEM48157.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_217_20
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17583..18776)
DNA (1194bp) protein (398aa)
glutamate 5-kinase
Glutamate 5-kinase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMA8_9GAMM
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_217_21

Not on your lists

comp(19388..19828)
DNA (441bp) protein (147aa)
DNA invertase (fragment)
DNA invertase n=1 Tax=mine drainage metagenome RepID=E6QUX8_9ZZZZ
DNA invertase {ECO:0000313|EMBL:CBI11051.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying 21 items

View Taxonomy
NameRatio
Acidithiobacillus ferrivorans
80.95%
mine drainage metagenome
14.29%
Acidithiobacillus caldus
4.76%
Acidithiobacillus ferrivorans: 0.8095238095238095mine drainage metagenome: 0.14285714285714285Acidithiobacillus caldus: 0.047619047619047616Acidithiobacillus ferrivoransmine drainage metagenome