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JSantini_Fe4_scaffold_219

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe4_scaffold_219_1
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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164..2200
DNA (2037bp) protein (679aa)
methionyl-tRNA synthetase
Methionine--tRNA ligase n=4 Tax=Acidithiobacillus RepID=SYM_ACIF2
Methionine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000255|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00098}; Short=MetRS {ECO:0000255|HAMAP-Rule:MF_00098};; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_219_2

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comp(2193..3311)
DNA (1119bp) protein (373aa)
phospho-2-dehydro-3-deoxyheptonate aldolase
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=mine drainage metagenome RepID=E6QE66_9ZZZZ
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:CBI05516.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CBI05516.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_219_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3403..4782)
DNA (1380bp) protein (460aa)
fumarate hydratase class II
Fumarate hydratase class II n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JKP3_9GAMM
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_219_4

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comp(4785..6581)
DNA (1797bp) protein (599aa)
oligoendopeptidase F
Oligoendopeptidase F n=1 Tax=mine drainage metagenome RepID=E6QE63_9ZZZZ
Oligoendopeptidase F {ECO:0000313|EMBL:CBI05514.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_219_5
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6625..7071)
DNA (447bp) protein (149aa)
hypothetical protein
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QE70_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ACK78037.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_219_6
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7233..8939
DNA (1707bp) protein (569aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JKP0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDQ09616.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_219_7

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comp(9041..9610)
DNA (570bp) protein (190aa)
3-deoxy-D-manno-octulosonic-acid transferase
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QE62_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI05511.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_219_8
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9771..11234
DNA (1464bp) protein (488aa)
glycogen synthase
Glycogen synthase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JKN9_9GAMM
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_219_9
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11322..12710
DNA (1389bp) protein (463aa)
RNA-metabolising metallo-beta-lactamase
RNA-metabolising metallo-beta-lactamase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JKN8_9GAMM
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:AEM46784.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_219_10
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12794..13210
DNA (417bp) protein (139aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JKN7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDQ09620.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_219_11
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13311..13961
DNA (651bp) protein (217aa)
endonuclease III
Endonuclease III n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JKN6_9GAMM
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_219_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13940..15082
DNA (1143bp) protein (381aa)
FIST C domain-containing protein
FIST C domain-containing protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JKN5_9GAMM
FIST C domain-containing protein {ECO:0000313|EMBL:AEM46781.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_219_13
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15138..15422
DNA (285bp) protein (95aa)
hypothetical protein
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QH88_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDQ09624.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_219_14
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15419..15934
DNA (516bp) protein (172aa)
Hemerythrin HHE cation binding domain-containing protein
Hemerythrin HHE cation binding domain protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JRL7_9GAMM
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:CDQ09625.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_219_15
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15936..16445
DNA (510bp) protein (170aa)
hypothetical protein
Putative uncharacterized protein n=3 Tax=Acidithiobacillus RepID=B5EPE5_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:CDQ09626.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_219_16
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16442..17062
DNA (621bp) protein (207aa)
ferredoxin
Ferredoxin n=3 Tax=Acidithiobacillus RepID=B7JBU7_ACIF2
Uncharacterized protein {ECO:0000313|EMBL:CDQ09627.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_219_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17138..18166)
DNA (1029bp) protein (343aa)
oxidoreductase FAD-binding domain-containing protein
Oxidoreductase FAD-binding domain protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JKN4_9GAMM
Oxidoreductase FAD-binding domain protein {ECO:0000313|EMBL:AEM46780.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_219_18
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18228..19769)
DNA (1542bp) protein (514aa)
hydroxylamine reductase
Hydroxylamine reductase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JKN3_9GAMM
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
Displaying 18 items

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