ggKbase home page

JSantini_Fe4_scaffold_506

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe4_scaffold_506_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3..1163)
DNA (1161bp) protein (387aa)
aspartyl-tRNA synthetase
Aspartate--tRNA ligase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQU1_9GAMM
Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS) {ECO:0000313|EMBL:CDQ11612.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CDQ11612.1};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_506_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1247..1507)
DNA (261bp) protein (87aa)
FmdB family regulatory protein
Regulatory protein, FmdB family n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQU2_9GAMM
Regulatory protein, FmdB family {ECO:0000313|EMBL:AEM46386.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_506_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1620..2276
DNA (657bp) protein (219aa)
multiple antibiotic resistance (MarC)-like protein
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQU3_9GAMM
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_506_4
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2301..2549)
DNA (249bp) protein (83aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQU4_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46388.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_506_5
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2805..4472
DNA (1668bp) protein (556aa)
ChvD family ATP-binding cassette protein
ATP-binding cassette protein, ChvD family n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQU5_9GAMM
Putative ABC-type transporter ATP-binding protein yjjK (Duplicated ATPase domains) {ECO:0000313|EMBL:CDQ11616.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_506_6
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4577..4711
DNA (135bp) protein (45aa)
50S ribosomal protein L34
50S ribosomal protein L34 n=4 Tax=Acidithiobacillus RepID=RL34_ACIF2
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe4_scaffold_506_7
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4716..5066
DNA (351bp) protein (117aa)
ribonuclease P protein component
Ribonuclease P protein component n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQU7_9GAMM
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_506_8
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5063..5278
DNA (216bp) protein (72aa)
hypothetical protein
Uncharacterized protein n=4 Tax=root RepID=E6QEG4_9ZZZZ
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_506_9
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5526..6899
DNA (1374bp) protein (458aa)
inner membrane protein
Membrane protein insertase YidC n=3 Tax=Acidithiobacillus RepID=B5EJI9_ACIF5
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_506_10
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6929..8284
DNA (1356bp) protein (452aa)
tRNA modification GTPase mnmE
tRNA modification GTPase MnmE n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQV0_9GAMM
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_506_11
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8281..11049
DNA (2769bp) protein (923aa)
two-component system, OmpR family, sensor kinase
Putative two-component system, OmpR family, sensor kinase n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IP53_LEPFC
Putative two-component system, OmpR family,sensor kinase {ECO:0000313|EMBL:CDQ10966.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_506_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11042..11404
DNA (363bp) protein (121aa)
response regulator receiver protein
Putative response regulator receiver protein n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IP52_LEPFC
Polar-differentiation response regulator DivK {ECO:0000313|EMBL:CDQ10965.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_506_13
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11421..12497
DNA (1077bp) protein (359aa)
response regulator receiver modulated metal dependent phosphohydrolase
Putative response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IP51_LEPFC
Putative response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:CDQ10964.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_506_14
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12511..12711)
DNA (201bp) protein (67aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQV1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDQ11622.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_506_15
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12722..14218)
DNA (1497bp) protein (499aa)
NRAMP family metal ion transporter
Metal ion transporter, NRAMP family n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQV2_9GAMM
Metal ion transporter, NRAMP family {ECO:0000313|EMBL:AEM46396.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_506_16
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14238..15293)
DNA (1056bp) protein (352aa)
ADP-ribosylglycohydrolase family protein
ADP-ribosylation/Crystallin J1 n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ERG6_ACIF5
ADP-ribosylglycohydrolase family protein {ECO:0000313|EMBL:ACK80837.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
Displaying 16 items

View Taxonomy