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JSantini_Fe8_scaffold_3

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Displaying items 1-30 of 259 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe8_scaffold_3_1
unknown

Not on your lists

3..71
DNA (69bp) protein (23aa)

This feature has no annotations

JSantini_Fe8_scaffold_3_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176..691)
DNA (516bp) protein (172aa)
exported protein of unknown function
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030A701F
Uncharacterized protein {ECO:0000313|EMBL:AIB11471.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
JSantini_Fe8_scaffold_3_3
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

915..2036
DNA (1122bp) protein (374aa)
putative FAD dependent oxidoreductase
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003620FE8
Oxidoreductase, FAD-binding protein {ECO:0000313|EMBL:EKN00243.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
JSantini_Fe8_scaffold_3_4
unknown

Not on your lists

2261..2908
DNA (648bp) protein (216aa)

This feature has no annotations

JSantini_Fe8_scaffold_3_5
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2976..3704)
DNA (729bp) protein (243aa)
Hypothetical protein
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003756383
Uncharacterized protein {ECO:0000313|EMBL:GAN75949.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
JSantini_Fe8_scaffold_3_6
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3701..6067)
DNA (2367bp) protein (789aa)
hypothetical protein
small-conductance mechanosensitive channel n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003775A73
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:KJC46091.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
JSantini_Fe8_scaffold_3_7
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6176..6367
DNA (192bp) protein (64aa)
hypothetical protein
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D25C9
Uncharacterized protein {ECO:0000313|EMBL:EHM03113.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
JSantini_Fe8_scaffold_3_8
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6444..7214
DNA (771bp) protein (257aa)
etfB; electron transfer flavoprotein subunit beta
Electron transfer flavoprotein beta-subunit n=3 Tax=Acidiphilium RepID=A5FUU4_ACICJ
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:KDM67291.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
JSantini_Fe8_scaffold_3_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7217..8155
DNA (939bp) protein (313aa)
electron transfer flavoprotein subunit alpha
electron transfer flavoprotein subunit beta n=1 Tax=Elioraea tepidiphila RepID=UPI00037D431F
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:GAN77927.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
JSantini_Fe8_scaffold_3_10
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8152..9084
DNA (933bp) protein (311aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQB2_GRABC
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ABI62990.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ABI62990.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
JSantini_Fe8_scaffold_3_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9217..11007
DNA (1791bp) protein (597aa)
diguanylate cyclase
Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQ36_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KGF79597.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
JSantini_Fe8_scaffold_3_12
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11267..12169
DNA (903bp) protein (301aa)
esterase, PHB depolymerase family
Esterase, PHB depolymerase family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KIQ4_MESAW
Uncharacterized protein {ECO:0000313|EMBL:KJV09770.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
JSantini_Fe8_scaffold_3_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12290..13498)
DNA (1209bp) protein (403aa)
coaBC; phosphopantothenoylcysteine decarboxylase (CoaC); Phosphopantothenatecysteine ligase (CoaB)
Phosphopantothenoylcysteine decarboxylase (CoaC) Phosphopantothenatecysteine ligase (CoaB) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z3Z1_AZOL4
Phosphopantothenoylcysteine synthase {ECO:0000313|EMBL:GAN76658.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
JSantini_Fe8_scaffold_3_14
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13498..14262)
DNA (765bp) protein (255aa)
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase ubi
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HI27_GLUDA
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
JSantini_Fe8_scaffold_3_15
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14293..15135
DNA (843bp) protein (281aa)
Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLG0_9PROT
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
JSantini_Fe8_scaffold_3_16
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15157..15954
DNA (798bp) protein (266aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLF9_9PROT
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAN76655.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
JSantini_Fe8_scaffold_3_17
Acetobacter cibinongensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16064..16333
DNA (270bp) protein (90aa)
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 n=1 Tax=Gluconobacter oxydans (strain 621H) RepID=RS20_GLUOX
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1231339 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter cibinongensis 4H-1.;"
JSantini_Fe8_scaffold_3_18
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16744..18282
DNA (1539bp) protein (513aa)
Chromosomal replication initiator protein dnaA
Chromosomal replication initiator protein DnaA n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVU3_GRABC
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
JSantini_Fe8_scaffold_3_19
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18301..19302)
DNA (1002bp) protein (334aa)
zinc-binding alcohol dehydrogenase family protein
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QPA0_METS6
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:ACT51935.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
JSantini_Fe8_scaffold_3_20
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19411..20124)
DNA (714bp) protein (238aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7S494_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN77909.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
JSantini_Fe8_scaffold_3_21
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20423..20725)
DNA (303bp) protein (101aa)
addiction module antitoxin
addiction module antitoxin n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624F44
Addiction module antitoxin {ECO:0000313|EMBL:KJF65158.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
JSantini_Fe8_scaffold_3_22
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20718..21023)
DNA (306bp) protein (102aa)
addiction module killer protein
Addiction module killer protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IVI0_METNO
Addiction module killer protein {ECO:0000313|EMBL:ACL62420.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
JSantini_Fe8_scaffold_3_23
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21209..21487)
DNA (279bp) protein (93aa)
DUF2312 family protein
UPF0335 protein HMPREF0731_1169 n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJA9_9PROT
UPF0335 protein HMPREF0731_1169 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
JSantini_Fe8_scaffold_3_24
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21541..21852)
DNA (312bp) protein (104aa)
hypothetical protein
alkaline phosphatase n=1 Tax=Elioraea tepidiphila RepID=UPI00036A3931
Uncharacterized protein {ECO:0000313|EMBL:ABQ29407.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
JSantini_Fe8_scaffold_3_25
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21946..23235
DNA (1290bp) protein (430aa)
hydroxypyruvate reductase (EC:1.1.1.81)
MOFRL family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4H7_9PROT
MOFRL family protein {ECO:0000313|EMBL:EHL98202.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
JSantini_Fe8_scaffold_3_26
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23232..24686
DNA (1455bp) protein (485aa)
Pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV91_GRABC
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
JSantini_Fe8_scaffold_3_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24888..25367
DNA (480bp) protein (160aa)
hypothetical protein
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F1B4C
Uncharacterized protein {ECO:0000313|EMBL:AHX14062.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
JSantini_Fe8_scaffold_3_28
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25364..26425
DNA (1062bp) protein (354aa)
methylated-DNA--protein-cysteine methyltransferase
DNA-O6-methylguanine--protein-cysteine S-methyltransferase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9V9_PARDP
DNA-O6-methylguanine--protein-cysteine S-methyltransferase {ECO:0000313|EMBL:ABL72303.1}; EC=2.1.1.63 {ECO:0000313|EMBL:ABL72303.1};; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
JSantini_Fe8_scaffold_3_29
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26584..27762
DNA (1179bp) protein (393aa)
murein transglycosylase (EC:3.2.1.-)
Murein transglycosylase n=1 Tax=Gluconobacter oxydans (strain 621H) RepID=Q5FR24_GLUOX
Murein transglycosylase {ECO:0000313|EMBL:AAW61172.1}; EC=3.2.1.- {ECO:0000313|EMBL:AAW61172.1};; TaxID=290633 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans (strain 621H) (Gluconobacter suboxydans).;"
JSantini_Fe8_scaffold_3_30
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27872..28534
DNA (663bp) protein (221aa)
MarC family integral membrane protein
MarC family integral membrane protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVJ0_GRABC
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Displaying items 1-30 of 259 in total

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