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JSantini_Fe8_scaffold_16

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Displaying items 1-30 of 111 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe8_scaffold_16_1
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..863)
DNA (861bp) protein (287aa)
Cytochrome c-type biogenesis protein DsbD (EC:1.8.1.8)
Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NY02_9GAMM
Cytochrome c-type biogenesis protein DsbD {ECO:0000313|EMBL:AIA55593.1}; EC=1.8.1.8 {ECO:0000313|EMBL:AIA55593.1};; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
JSantini_Fe8_scaffold_16_2
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(863..1393)
DNA (531bp) protein (177aa)
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YU81_9THEM
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
JSantini_Fe8_scaffold_16_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1523..2239)
DNA (717bp) protein (239aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM15_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46965.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe8_scaffold_16_4
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2232..3110)
DNA (879bp) protein (293aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM16_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46966.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe8_scaffold_16_5
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3203..3505)
DNA (303bp) protein (101aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM17_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46967.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe8_scaffold_16_6
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3591..4079)
DNA (489bp) protein (163aa)
DoxX family protein
DoxX family protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM18_9GAMM
DoxX family protein {ECO:0000313|EMBL:AEM46968.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe8_scaffold_16_7
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4190..4471)
DNA (282bp) protein (94aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM20_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46970.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe8_scaffold_16_8
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4560..4766)
DNA (207bp) protein (69aa)
DsrE family protein
DsrE family protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI000262520E
DsrE family protein {ECO:0000313|EMBL:AIA55590.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
JSantini_Fe8_scaffold_16_9
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4782..6047)
DNA (1266bp) protein (422aa)
Major facilitator superfamily (MFS) transporter
MFS transporter n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI000262520F
Major facilitator superfamily (MFS) transporter {ECO:0000313|EMBL:AIA55589.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
JSantini_Fe8_scaffold_16_10
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6044..6406)
DNA (363bp) protein (121aa)
ArsR family transcriptional regulator
ArsR family transcriptional regulator n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625210
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEK57200.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_Fe8_scaffold_16_11
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6403..7140)
DNA (738bp) protein (246aa)
metallo-beta-lactamase family protein
beta-lactamase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625211
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:AEK57201.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_Fe8_scaffold_16_12
Thiobacillus sp., Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7319..9007)
DNA (1689bp) protein (563aa)
Mercuric ion reductase (EC:1.16.1.1)
Mercuric reductase n=1 Tax=Thiobacillus sp. RepID=O54319_9PROT
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=924 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus sp.;"
JSantini_Fe8_scaffold_16_13
Thiobacillus sp., Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9000..9296)
DNA (297bp) protein (99aa)
merP; mercuric transporter periplasmic component
Periplasmic transport protein Mer P n=1 Tax=Thiobacillus sp. RepID=O54318_9PROT
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=924 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus sp.;"
JSantini_Fe8_scaffold_16_14
Thiobacillus sp., Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9309..9659)
DNA (351bp) protein (117aa)
mercuric transport protein MerT
Periplasmic transport protein Mer T n=1 Tax=Thiobacillus sp. RepID=O54317_9PROT
Periplasmic transport protein Mer T {ECO:0000313|EMBL:CAA72396.1}; TaxID=924 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus sp.;"
JSantini_Fe8_scaffold_16_15
Thiobacillus sp., Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9737..10162
DNA (426bp) protein (142aa)
MerR family transcriptional regulator
Regulatory protein Mer R n=1 Tax=Thiobacillus sp. RepID=O54316_9PROT
Regulatory protein Mer R {ECO:0000313|EMBL:CAA72395.1}; TaxID=924 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus sp.;"
JSantini_Fe8_scaffold_16_16
Vibrio sp. RC586, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10461..12053)
DNA (1593bp) protein (531aa)
transposon Tn7 transposition transposition regulatory protein TnsE
Transposon Tn7 transposition transposition regulatory protein TnsE n=1 Tax=Vibrio sp. RC586 RepID=D0IIB4_9VIBR
Transposon Tn7 transposition transposition regulatory protein TnsE {ECO:0000313|EMBL:EEY99530.1}; TaxID=675815 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. RC586.;"
JSantini_Fe8_scaffold_16_17
Marinobacter sp. C1S70, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12028..13581)
DNA (1554bp) protein (518aa)
transposon Tn7 transposition protein, TnsD
Transcriptional antiterminator n=1 Tax=Marinobacter sp. C1S70 RepID=U7NS59_9ALTE
Transcriptional antiterminator {ECO:0000313|EMBL:ERS85294.1}; TaxID=1396859 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. C1S70.;"
JSantini_Fe8_scaffold_16_18
Marinobacter sp. C1S70, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13581..15236)
DNA (1656bp) protein (552aa)
transposon Tn7 transposition protein, TnsC
Transcriptional antiterminator n=1 Tax=Marinobacter sp. C1S70 RepID=U7NSE7_9ALTE
Transcriptional antiterminator {ECO:0000313|EMBL:ERS85295.1}; TaxID=1396859 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. C1S70.;"
JSantini_Fe8_scaffold_16_19
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15233..17308)
DNA (2076bp) protein (692aa)
transposon Tn7 transposition protein, TnsB
Transposon Tn7 transposition protein, TnsB n=1 Tax=Shewanella putrefaciens (strain 200) RepID=E6XKZ1_SHEP2
Tax=DS1215_Halomonas_54_146
JSantini_Fe8_scaffold_16_20
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17292..18110)
DNA (819bp) protein (273aa)
transposon Tn7 transposition protein, TnsA
Transposon Tn7 transposition protein, TnsA n=1 Tax=Shewanella putrefaciens (strain 200) RepID=E6XKZ2_SHEP2
Tax=DS1215_Halomonas_54_146
JSantini_Fe8_scaffold_16_21
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18246..20093)
DNA (1848bp) protein (616aa)
glucosamine--fructose-6-phosphate aminotransferase
glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026250CE
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe8_scaffold_16_22
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20250..21632)
DNA (1383bp) protein (461aa)
bifunctional protein glmU
bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026250CF
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe8_scaffold_16_23
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21726..22151)
DNA (426bp) protein (142aa)
atpC; F0F1 ATP synthase subunit epsilon
F0F1 ATP synthase subunit epsilon n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026250D0
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe8_scaffold_16_24
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22155..23564)
DNA (1410bp) protein (470aa)
ATP synthase subunit beta
F0F1 ATP synthase subunit beta n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026250D1
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe8_scaffold_16_25
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23606..24472)
DNA (867bp) protein (289aa)
ATP synthase subunit gamma
F0F1 ATP synthase subunit gamma n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026250D2
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe8_scaffold_16_26
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24482..26026)
DNA (1545bp) protein (515aa)
ATP synthase subunit alpha
F0F1 ATP synthase subunit alpha n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026250D3
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe8_scaffold_16_27
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26045..26584)
DNA (540bp) protein (180aa)
ATP synthase subunit delta
ATP synthase subunit delta n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026250D4
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe8_scaffold_16_28
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26594..27073)
DNA (480bp) protein (160aa)
ATP synthase subunit b
ATP synthase subunit B n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026250D5
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe8_scaffold_16_29
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27116..27370)
DNA (255bp) protein (85aa)
ATP synthase subunit c
ATP synthase subunit c n=6 Tax=Acidithiobacillus RepID=ATPL_ACIF2
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=920 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (Thiobacillus ferrooxidans).;"
JSantini_Fe8_scaffold_16_30
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27416..28165)
DNA (750bp) protein (250aa)
ATP synthase subunit a
ATP synthase subunit a n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JLU6_9GAMM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
Displaying items 1-30 of 111 in total

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