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JSantini_Fe8_scaffold_178

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe8_scaffold_178_trna_1
unknown

Not on your lists

81..154
DNA (74bp)
transferRNA Pro
JSantini_Fe8_scaffold_178_1
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230..1405)
DNA (1176bp) protein (392aa)
hypothetical protein
Phage integrase, putative n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XTE1_9GAMM
Phage integrase, putative {ECO:0000313|EMBL:EGQ62984.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_2
unknown

Not on your lists

comp(1407..1631)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI00037196E9
JSantini_Fe8_scaffold_178_3
unknown

Not on your lists

comp(1628..2611)
DNA (984bp) protein (328aa)

This feature has no annotations

JSantini_Fe8_scaffold_178_4
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2608..3003)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XM02_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ60745.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_5
Pseudomonas amygdali, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3754..4671)
DNA (918bp) protein (306aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA01 RepID=V4R786_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EGH82380.1}; TaxID=629260 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali.;" source="Pseudomonas amygdali pv. lachrymans str. M301315.;"
JSantini_Fe8_scaffold_178_6
Leptospirillum ferrooxidans, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5125..6426)
DNA (1302bp) protein (434aa)
transposase
Transposase n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IPQ8_LEPFC
Transposase {ECO:0000313|EMBL:BAM07257.1}; TaxID=1162668 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrooxidans (strain C2-3).;"
JSantini_Fe8_scaffold_178_7
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6556..6708
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XSE9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ62642.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_8
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6699..7019
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XSF0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ62643.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_9
unknown

Not on your lists

7043..7762
DNA (720bp) protein (240aa)

This feature has no annotations

JSantini_Fe8_scaffold_178_10
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7773..8831
DNA (1059bp) protein (353aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XSF3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ62646.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_11
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8834..9088
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XQR5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ62058.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_12
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9066..9242
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XQR5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ62058.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_13
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9468..9839
DNA (372bp) protein (124aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XVY0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ63873.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_14
Candidatus Hamiltonella defensa, Candidatus Hamiltonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9836..10015)
DNA (180bp) protein (60aa)
hypothetical protein
Ribonuclease VapC n=1 Tax=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) RepID=C4K384_HAMD5
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=572265 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; aphid secondary symbionts; Candidatus Hamiltonella.;" source="Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT).;"
JSantini_Fe8_scaffold_178_15
Pseudomonas savastanoi, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10012..10266)
DNA (255bp) protein (85aa)
plasmid stabilization protein
Putative plasmid stability protein y4jJ n=2 Tax=Pseudomonas syringae pv. savastanoi RepID=D7I721_PSESS
Putative plasmid stabilization protein {ECO:0000313|EMBL:EGH16767.1}; TaxID=875330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas savastanoi pv. glycinea str. race 4.;"
JSantini_Fe8_scaffold_178_16
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10462..10917)
DNA (456bp) protein (152aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTS3_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM49038.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe8_scaffold_178_17
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10886..11401)
DNA (516bp) protein (172aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XVY1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ63874.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_18
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11470..11763)
DNA (294bp) protein (98aa)
addiction module, antitoxin
Addiction module, antitoxin n=1 Tax=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) RepID=C3M8D4_HAMD5
Uncharacterized protein {ECO:0000313|EMBL:KGM53024.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
JSantini_Fe8_scaffold_178_19
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11775..12053)
DNA (279bp) protein (93aa)
Plasmid maintenance system killer
HigB toxin protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX11_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGM53023.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
JSantini_Fe8_scaffold_178_20
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13017..13466
DNA (450bp) protein (150aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XN44_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ61137.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_21
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13519..13755
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XN45_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ61138.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_22
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13712..13960
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XN46_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ61139.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_23
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14594..14908
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XN47_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ61140.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_24
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14905..16773
DNA (1869bp) protein (623aa)
Type IV secretory pathway VirD4 components-like protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XN48_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ61141.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_178_25
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16770..19400
DNA (2631bp) protein (877aa)
putative ATP-dependent exoDNAse (exonuclease V), alpha subunit-helicase superfamily I member
Conjugative relaxase domain protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XN49_9GAMM
Conjugative relaxase domain protein {ECO:0000313|EMBL:EGQ61142.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
Displaying 26 items

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