ggKbase home page

JSantini_Fe8_scaffold_50_18

Organism: Plasmid_Acidithiobacillus_60_86

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(15456..17960)

Top 3 Functional Annotations

Value Algorithm Source
Conjugative transfer protein TrbE similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 822.0
  • Bit_score: 990
  • Evalue 1.70e-286
Putative Type IV secretory pathway, VirB4 component (CagE, TrbE, VirB ) n=1 Tax=mine drainage metagenome RepID=E6QB72_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 830.0
  • Bit_score: 994
  • Evalue 5.50e-287
Putative Type IV secretory pathway, VirB4 component (CagE, TrbE, VirB ) {ECO:0000313|EMBL:CBI04448.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 830.0
  • Bit_score: 994
  • Evalue 7.70e-287

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 2505
ATGCTTAACATCAAAGAGTTCCGGGACAAAAACAAGGCATTCCCAGATCTGCTGAACCTGGCTTGTCTGGTGGATTCCGCCACCATTCTTGGCCAGCCGTGCGCCATCGCCTTGCAAAAGGACGGATCGCTGATGGCGGGCCTGCGGTTTTCGGGGCCTGATCTGGAAAGCATGTCGCACACGGCCATCAATCGCCTGTCCGCCAGCCTCAATGCCGCTCTGGCGCGGCTGGGCGATGGCTGGGCTACGCATGTTACGGCCATCCGCGACCATGCTGACGGATACATCGATCCCGCTGAAAACCACTTCGCGGACCCGGTGTCGCAACTCATCGACGACGAGCGCCGCCTGCAGTTCGAGCGTGAGGACGCGCACTTCCTGACCCGTTACACCCTGGTTTTTTCGTGGCAGACGCCGCCGGATACCAGCGTTGCTGCTGGGCAGGTGTTCGTCGAAAGCCGCAATGCGCCTGAGCAGAAGTCTTTTGAAGCGGTCATCCGCAAGTTCGTGGATCTGGTTCAAGGCACGGCGGGTATGTTGAAAGACCGCTTCAAGGTGTCGCCCCTGGACGATACGGCGCTGCTGACGCACATTCATGAGTGCATCACGGGCAAGCCGCACAGGGTCAATGCGCCGGACTTTCCCGTGTACCTGGACACCGTCATTGGGCACCACGAATTTGTCGCCGGGCTGGAACCGAAGATCGACGACCAGCATATTCGCGTCCTGACGTTTACCGGGTACCCGCAAGCTACCCAGCCGGAAATTCTGGAAGCGCTGCACAATTTGCCATTCCCGCTGCGCTACACCACCCGATTTGTGTATATGGACCAGAAGTCCGCTCGCAAGCATATAGAGGCATACCGGCAGCACTGGCTGGGCGCGCGGTATAATATGCGGGACTACATGGGTGCGGCCATAGACAAGGGCCACCTGCCCGCGCAGAACGCGAATGCCGACGCCGCCGGCATGGCCGATGATGCCCAGATCGCGGCGGCGGAAGCCAGCGGTGGCGTTGTGCGGTACGGTTTTTTTACGGCGACCGTGATCCTGATGGACAGCAATCTGGCGGTGCTGACCGAGCGTGTCCGGATGACCGAGGCCTACCTGAACAACAGCGGCTTCGTGGCGTTCAAGGAAAGCACCAACTCGGTCGAGGCGTACCTGGGGTCCATCCCCGGGCACACCTGGGAAAACGTCCGCAAGCCGCTGATGCACAGCCTCAACTACGCCGACTTGTCACCGAAAACATCGGTCTGGCCGGGTAGCCTGCGGTGCCCGTCGCCTTTGATGGCCGTGGATGGCAAAAAGGTCCCGGCACTGACGTATGCAAAGACGTCCGGGGCTACGCCATTCCGGTTCAATTTGCATGTGAGCGACAAGGGACACGGCCTGATCGCCGGCCCCGCCGGATCGGGCAAGTCCAGTATCCTCGCCCTGCTCGCCGCGCAGTGGTTGCGCTATAAAAACGCCCGCGTGATCAGCTTCGACACTGGCCGGTCTATGTACGCCCTGACCGAGGCGGTGGGTGGACAGCACTACGATATTGCGGGTGAACTGTCCGACCTCACCTTCGCGCCGCTGGACCGCATCGCGGAAGCCAGCATCGAGCGCGCCTTCGCCGAGGGGTGGCTGGAATCACTGGCGGTGCTGCAGGGACTTACCATCACCCCCGCGGAACGCGCCGTGATCCACAAAGCCGTCGATGGGCTGGCGGGCGAAGAGGGCCGATCGATTACCGACGTGCAGTCGCTTTTGCAACATCCCGACCTCAAAGCGGCCATCGGCTTTTATGCTGGGACGGGCCGCGCGGGAACGCTGCTGGATGCCCGGCATGACAGCCTGGATTTGACCAGCCGCTTCCTCACTTTTGAACTGGAGAACCTGCTGCAGGGCGGGGAGTCCGCGAAGCTGGTTACCGTGCCCACCCTGCTGTACCTGTTTCACCGCATCGAGCGCATGCTGGACGGCAGCCCAACCCTGATCCTGCTGGACGAGGCGTGGACAATGCTACAGAACGCGCAGTTCCTGGAAAAGATACGCAAGTGGCTGAAGGTCCTGCGGAAGAAAAACGCGGTCGTGGTGTTCGCCACGCAGTCGCTGACGGACTTGAAAGACAACCCGCTGCTGCCGATTATCATGGAAGAATGCCCAACCAAGATTTTCCTGCCCAACAGCCAGGCGGGCAGTCCACAGTTGCGCCCACTGTATGTCGATTTCGGGCTGGAAGACCGGCAGATCGAATTGCTGCAGACGTCTACCCCGAAGCAGGACTACTACGTGTTCTCGGACGCCGGGCATCGCCGGGTGTCATTCGACATGGGACCGGTGACGCTGGCTTTCACGGGCGTCAGCGACCCCCGCGACGTGAAGCGGGTGGCGGAACTGAAGGGCATTCATGGCCGCCGCTGGCCCGTTGAGTGGCTGAAAGATCGCCTGCCGCGGAACATCGTGGACGGGTGGGTGGATTATGGCCGGACGCTCTTTGATCAGTTTGGGTTATGA
PROTEIN sequence
Length: 835
MLNIKEFRDKNKAFPDLLNLACLVDSATILGQPCAIALQKDGSLMAGLRFSGPDLESMSHTAINRLSASLNAALARLGDGWATHVTAIRDHADGYIDPAENHFADPVSQLIDDERRLQFEREDAHFLTRYTLVFSWQTPPDTSVAAGQVFVESRNAPEQKSFEAVIRKFVDLVQGTAGMLKDRFKVSPLDDTALLTHIHECITGKPHRVNAPDFPVYLDTVIGHHEFVAGLEPKIDDQHIRVLTFTGYPQATQPEILEALHNLPFPLRYTTRFVYMDQKSARKHIEAYRQHWLGARYNMRDYMGAAIDKGHLPAQNANADAAGMADDAQIAAAEASGGVVRYGFFTATVILMDSNLAVLTERVRMTEAYLNNSGFVAFKESTNSVEAYLGSIPGHTWENVRKPLMHSLNYADLSPKTSVWPGSLRCPSPLMAVDGKKVPALTYAKTSGATPFRFNLHVSDKGHGLIAGPAGSGKSSILALLAAQWLRYKNARVISFDTGRSMYALTEAVGGQHYDIAGELSDLTFAPLDRIAEASIERAFAEGWLESLAVLQGLTITPAERAVIHKAVDGLAGEEGRSITDVQSLLQHPDLKAAIGFYAGTGRAGTLLDARHDSLDLTSRFLTFELENLLQGGESAKLVTVPTLLYLFHRIERMLDGSPTLILLDEAWTMLQNAQFLEKIRKWLKVLRKKNAVVVFATQSLTDLKDNPLLPIIMEECPTKIFLPNSQAGSPQLRPLYVDFGLEDRQIELLQTSTPKQDYYVFSDAGHRRVSFDMGPVTLAFTGVSDPRDVKRVAELKGIHGRRWPVEWLKDRLPRNIVDGWVDYGRTLFDQFGL*