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JSantini_Fe8_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe8_scaffold_50_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..379)
DNA (378bp) protein (126aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM67_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM48117.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe8_scaffold_50_2
unknown

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comp(508..771)
DNA (264bp) protein (88aa)

This feature has no annotations

JSantini_Fe8_scaffold_50_3
Fusarium oxysporum, Fusarium, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

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comp(882..2693)
DNA (1812bp) protein (604aa)
surface protein
Uncharacterized protein n=1 Tax=Fusarium oxysporum (strain Fo5176) RepID=F9FHC6_FUSOF
Uncharacterized protein {ECO:0000313|EMBL:EXM14972.1}; TaxID=1089449 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex.;" source="Fusarium oxysporum f. sp. vasinfectum 25433.;"
JSantini_Fe8_scaffold_50_4
unknown

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comp(2690..3070)
DNA (381bp) protein (127aa)

This feature has no annotations

JSantini_Fe8_scaffold_50_5
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3070..3303)
DNA (234bp) protein (78aa)
lipoprotein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624B28
Lipoprotein, putative {ECO:0000313|EMBL:ACK79258.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe8_scaffold_50_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3366..5027)
DNA (1662bp) protein (554aa)
helicase
Helicase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FB43_CONWI
Helicase domain protein {ECO:0000313|EMBL:ADB53235.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
JSantini_Fe8_scaffold_50_7
unknown

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comp(5147..5617)
DNA (471bp) protein (157aa)

This feature has no annotations

JSantini_Fe8_scaffold_50_8
unknown

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comp(5632..5865)
DNA (234bp) protein (78aa)

This feature has no annotations

JSantini_Fe8_scaffold_50_9
unknown

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comp(5973..6245)
DNA (273bp) protein (91aa)

This feature has no annotations

JSantini_Fe8_scaffold_50_10
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6275..7564)
DNA (1290bp) protein (430aa)
Conjugative transfer protein TrbI
TrbI protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NY89_9GAMM
Conjugative transfer protein TrbI {ECO:0000313|EMBL:AIA55689.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
JSantini_Fe8_scaffold_50_11
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7575..8675)
DNA (1101bp) protein (367aa)
conjugative transfer protein TrbG
Conjugative transfer protein TrbG n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZMU2_ACICS
Conjugative transfer protein TrbG {ECO:0000313|EMBL:AEK57851.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_Fe8_scaffold_50_12
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8687..9361)
DNA (675bp) protein (225aa)
conjugative transfer protein TrbF
Conjugal transfer protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XSV8_9GAMM
Conjugal transfer protein {ECO:0000313|EMBL:EGQ62801.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_50_13
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9443..11068)
DNA (1626bp) protein (542aa)
conjugative transfer protein TrbL
Plasmid conjugation-like protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XX96_9GAMM
Plasmid conjugation-like protein {ECO:0000313|EMBL:EGQ64339.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_50_14
unknown

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comp(11150..11389)
DNA (240bp) protein (80aa)

This feature has no annotations

JSantini_Fe8_scaffold_50_15

Not on your lists

comp(11505..12278)
DNA (774bp) protein (258aa)
P-type conjugative transfer protein TrbJ
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QB86_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI04462.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe8_scaffold_50_16
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12280..13254)
DNA (975bp) protein (325aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XX99_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ64342.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_50_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13307..15082)
DNA (1776bp) protein (592aa)
HNH endonuclease domain-containing protein
HNH endonuclease domain protein n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) RepID=B7J9G9_ACIF2
HNH endonuclease domain protein {ECO:0000313|EMBL:CDQ10049.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe8_scaffold_50_18

Not on your lists

comp(15456..17960)
DNA (2505bp) protein (835aa)
Conjugative transfer protein TrbE
Putative Type IV secretory pathway, VirB4 component (CagE, TrbE, VirB ) n=1 Tax=mine drainage metagenome RepID=E6QB72_9ZZZZ
Putative Type IV secretory pathway, VirB4 component (CagE, TrbE, VirB ) {ECO:0000313|EMBL:CBI04448.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe8_scaffold_50_19
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17953..18339)
DNA (387bp) protein (129aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZMR8_ACICS
Uncharacterized protein {ECO:0000313|EMBL:AEK57828.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_Fe8_scaffold_50_20
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18341..18709)
DNA (369bp) protein (123aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XL30_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ60423.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_50_21

Not on your lists

comp(18791..19264)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QB73_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI04449.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe8_scaffold_50_22

Not on your lists

comp(19290..20255)
DNA (966bp) protein (322aa)
Conjugative transfer protein TrbB
KlbA protein n=1 Tax=mine drainage metagenome RepID=E6QB76_9ZZZZ
KlbA protein {ECO:0000313|EMBL:CBI04452.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe8_scaffold_50_23
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20259..20708)
DNA (450bp) protein (150aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XUM0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ63413.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe8_scaffold_50_24

Not on your lists

comp(20772..22355)
DNA (1584bp) protein (528aa)
Type IV secretory pathway, VirD2 components (relaxase)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QB78_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI04454.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe8_scaffold_50_25
unknown

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comp(22352..22549)
DNA (198bp) protein (66aa)

This feature has no annotations

JSantini_Fe8_scaffold_50_26

Not on your lists

comp(22546..23736)
DNA (1191bp) protein (397aa)
Conjugal transfer protein traB
Putative Permease of the major facilitator superfamily n=1 Tax=mine drainage metagenome RepID=E6QC97_9ZZZZ
Putative Permease of the major facilitator superfamily {ECO:0000313|EMBL:CBI04823.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe8_scaffold_50_27
unknown

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comp(23720..23926)
DNA (207bp) protein (69aa)

This feature has no annotations

JSantini_Fe8_scaffold_50_28

Not on your lists

comp(24041..24688)
DNA (648bp) protein (216aa)
hypothetical protein
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QB80_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI04456.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe8_scaffold_50_29
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24685..24870)
DNA (186bp) protein (62aa)
anaerobic ribonucleoside-triphosphate reductase family protein
Anaerobic ribonucleoside triphosphate reductase n=20 Tax=pseudomallei group RepID=C4KQV4_BURPE
Uncharacterized protein {ECO:0000313|EMBL:ABN84107.1}; TaxID=320373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 668).;"
JSantini_Fe8_scaffold_50_30
unknown

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comp(24863..25075)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying items 1-30 of 81 in total

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