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JSantini_S4_scaffold_159

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Displaying items 1-30 of 54 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_S4_scaffold_159_1
unknown

Not on your lists

59..184
DNA (126bp) protein (42aa)

This feature has no annotations

JSantini_S4_scaffold_159_2
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

606..2009
DNA (1404bp) protein (468aa)
DNA methyltransferase C1
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B6107A
DNA methyltransferase C1 {ECO:0000313|EMBL:ACI20387.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;"
JSantini_S4_scaffold_159_3
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2012..2992
DNA (981bp) protein (327aa)
type II restriction enzyme
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B3FBBC
Putative type II restriction enzyme {ECO:0000313|EMBL:ACI21824.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;"
JSantini_S4_scaffold_159_4
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(3126..3638)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LL64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB65003.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-plasma.;"
JSantini_S4_scaffold_159_5
unknown

Not on your lists

3718..3825
DNA (108bp) protein (36aa)

This feature has no annotations

JSantini_S4_scaffold_159_6
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(3911..4381)
DNA (471bp) protein (157aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D4E7_PELTS
Tax=CG_Anaero_01
JSantini_S4_scaffold_159_7
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

4680..5294
DNA (615bp) protein (205aa)
transposase
Transposase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ATQ2_FERAC
Transposase {ECO:0000313|EMBL:AGO61545.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_8
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

5328..5891
DNA (564bp) protein (188aa)
transposase
Transposase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ATQ2_FERAC
Transposase {ECO:0000313|EMBL:AGO61346.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_9
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

6445..7605
DNA (1161bp) protein (387aa)
transposase (04)
Transposase (04) n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ATR4_FERAC
Transposase (04) {ECO:0000313|EMBL:AGO61544.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_10
unknown

Not on your lists

7618..7788
DNA (171bp) protein (57aa)

This feature has no annotations

JSantini_S4_scaffold_159_11
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

7785..7928
DNA (144bp) protein (48aa)
transposase
Transposase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ATN0_FERAC
Transposase {ECO:0000313|EMBL:AGO61500.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_12
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(7942..8892)
DNA (951bp) protein (317aa)
transposase
Transposase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AQK3_FERAC
Transposase {ECO:0000313|EMBL:AGO60459.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_13
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

9416..9697
DNA (282bp) protein (94aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AR34_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO60555.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_14
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(9688..11448)
DNA (1761bp) protein (587aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AQV8_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO60554.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_15
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

11567..13690
DNA (2124bp) protein (708aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AMP7_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO60553.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_16
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(14000..14602)
DNA (603bp) protein (201aa)
resolvase protein
Resolvase protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ATV4_FERAC
Resolvase protein {ECO:0000313|EMBL:AGO61675.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_17
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(14607..15674)
DNA (1068bp) protein (356aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ATW6_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61674.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_18
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(15671..15907)
DNA (237bp) protein (79aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AR53_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61673.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_19
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(15904..16059)
DNA (156bp) protein (52aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ASA0_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61672.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_20
unknown

Not on your lists

comp(16103..16519)
DNA (417bp) protein (139aa)

This feature has no annotations

JSantini_S4_scaffold_159_21
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(17506..17667)
DNA (162bp) protein (54aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ASZ2_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61195.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_22
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

17812..18555
DNA (744bp) protein (248aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AQH2_FERAC
CRISPR-associated endoribonuclease {ECO:0000256|PIRNR:PIRNR005054}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_23
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

18555..20396
DNA (1842bp) protein (614aa)
CRISPR-associated Csh1 family protein
CRISPR-associated Csh1 family protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AR03_FERAC
CRISPR-associated Csh1 family protein {ECO:0000313|EMBL:AGO61197.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_24
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

20399..21316
DNA (918bp) protein (306aa)
CRISPR-associated Csh2 family protein
CRISPR-associated Csh2 family protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0APK0_FERAC
CRISPR-associated Csh2 family protein {ECO:0000313|EMBL:AGO61198.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_25
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

21319..22089
DNA (771bp) protein (257aa)
CRISPR-associated Cas5 family Hmari subtype protein
CRISPR-associated Cas5 family Hmari subtype protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AT34_FERAC
CRISPR-associated Cas5 family Hmari subtype protein {ECO:0000313|EMBL:AGO61199.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_26
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

22070..24490
DNA (2421bp) protein (807aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ASZ7_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61200.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_27
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24493..24990
DNA (498bp) protein (166aa)
CRISPR-associated protein Cas4
CRISPR-associated protein Cas4 n=7 Tax=Clostridium thermocellum RepID=A3DHS1_CLOTH
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ABN53500.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
JSantini_S4_scaffold_159_28
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

24996..25988
DNA (993bp) protein (331aa)
hypothetical protein
CRISPR-associated endonuclease Cas1 n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0APK5_FERAC
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_29
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

25994..26257
DNA (264bp) protein (88aa)
CRISPR-associated protein Cas2
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AT40_FERAC
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_159_30
unknown

Not on your lists

comp(29525..29770)
DNA (246bp) protein (82aa)

This feature has no annotations

Displaying items 1-30 of 54 in total

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