ggKbase home page

JSantini_S4_scaffold_247

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_S4_scaffold_247_1
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

56..760
DNA (705bp) protein (235aa)
hypothetical protein
Proteasome subunit alpha n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AN25_FERAC
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {ECO:0000256|HAMAP-Rule:MF_00289}; Proteasome core protein PsmA {ECO:0000256|HAMAP-Rule:MF_00289}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_247_2
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

881..2161
DNA (1281bp) protein (427aa)
hypothetical protein
Adenylosuccinate synthetase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0APH8_FERAC
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_247_trna_1
unknown

Not on your lists

2218..2292
DNA (75bp)
transferRNA Glu
JSantini_S4_scaffold_247_3
unknown

Not on your lists

comp(2857..2952)
DNA (96bp) protein (32aa)

This feature has no annotations

JSantini_S4_scaffold_247_4

Not on your lists

comp(3130..4224)
DNA (1095bp) protein (365aa)
alanine racemase domain protein
Low-specificity D-threonine aldolase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AXG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AKA47833.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
JSantini_S4_scaffold_247_5
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

4266..4634
DNA (369bp) protein (123aa)
endoribonuclease L-PSP
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LKH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB64833.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-plasma.;"
JSantini_S4_scaffold_247_6
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(4659..5498)
DNA (840bp) protein (280aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AMQ4_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO60563.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_247_7

Not on your lists

5636..6394
DNA (759bp) protein (253aa)
hypothetical protein
3-oxoacyl-ACP reductase n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000287F48A
Putative short chain dehydrogenase {ECO:0000313|EMBL:ABZ10145.1}; TaxID=455559 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG10H11.;"
JSantini_S4_scaffold_247_8
Acidilobus saccharovorans, Acidilobus, Acidilobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

6740..8254
DNA (1515bp) protein (505aa)
cationic amino acid permease
Probable cationic amino acid permease n=1 Tax=Acidilobus saccharovorans (strain DSM 16705 / VKM B-2471 / 345-15) RepID=D9PZ36_ACIS3
Probable cationic amino acid permease {ECO:0000313|EMBL:ADL19823.1}; TaxID=666510 species="Archaea; Crenarchaeota; Thermoprotei; Acidilobales; Acidilobaceae; Acidilobus.;" source="Acidilobus saccharovorans (strain DSM 16705 / JCM 18335 / VKM B-2471 /; 345-15).;"
JSantini_S4_scaffold_247_9
Picrophilus torridus, Picrophilus, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(8320..9300)
DNA (981bp) protein (327aa)
N-acetylglucosamine kinase (EC:2.7.1.59)
N-acetylglucosamine kinase n=1 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=Q6L355_PICTO
N-acetylglucosamine kinase {ECO:0000313|EMBL:AAT42596.1}; EC=2.7.1.59 {ECO:0000313|EMBL:AAT42596.1};; TaxID=263820 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Picrophilaceae; Picrophilus.;" source="Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC; 100828).;"
JSantini_S4_scaffold_247_10
Picrophilus torridus, Picrophilus, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(9297..10238)
DNA (942bp) protein (314aa)
isomerizing glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Isomerizing glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=Q6L354_PICTO
Isomerizing glucosamine--fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:AAT42597.1}; EC=2.6.1.16 {ECO:0000313|EMBL:AAT42597.1};; TaxID=263820 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Picrophilaceae; Picrophilus.;" source="Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC; 100828).;"
JSantini_S4_scaffold_247_11
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(10613..11026)
DNA (414bp) protein (138aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ARE3_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO60665.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_247_12
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

11568..12956
DNA (1389bp) protein (463aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AR94_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO60664.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_247_13
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(13020..13871)
DNA (852bp) protein (284aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AN19_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO60663.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_247_14
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(14156..14509)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LUF7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB68164.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.;"
JSantini_S4_scaffold_247_trna_2
unknown

Not on your lists

comp(14663..14735)
DNA (73bp)
transferRNA Val
JSantini_S4_scaffold_247_15
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(14769..15848)
DNA (1080bp) protein (360aa)
zinc metalloprotease (EC:3.4.24.-)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0NKY9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB74035.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
JSantini_S4_scaffold_247_16
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

16047..16157
DNA (111bp) protein (37aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AN13_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO60658.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
Displaying 18 items

View Taxonomy