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JSantini_S4_scaffold_452

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_S4_scaffold_452_1
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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1..81
DNA (81bp) protein (27aa)
DNA repair and recombination protein RadB
DNA repair and recombination protein RadB n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ATQ8_FERAC
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_452_2
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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84..1103
DNA (1020bp) protein (340aa)
hypothetical protein
Flap endonuclease 1 n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ATS0_FERAC
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_452_3
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1100..1378)
DNA (279bp) protein (93aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AQP3_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61558.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_452_4
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1379..2368)
DNA (990bp) protein (330aa)
hypothetical protein
Tyrosine--tRNA ligase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ARX5_FERAC
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02009, ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02009, ECO:0000256|SAAS:SAAS00011232};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02009}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_452_5
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(2401..2583)
DNA (183bp) protein (61aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ARF6_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61556.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_452_6
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(2631..4253)
DNA (1623bp) protein (541aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ATQ6_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61555.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_452_7
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

4659..8129
DNA (3471bp) protein (1157aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ATR8_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61554.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_452_8
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

8107..8886
DNA (780bp) protein (260aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AQN8_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61553.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_452_9
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(8883..9878)
DNA (996bp) protein (332aa)
hypothetical protein
DNA repair and recombination protein RadA n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ARX2_FERAC
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_452_10
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(9880..10893)
DNA (1014bp) protein (338aa)
hypothetical protein
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ARF1_FERAC
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388};; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
Displaying 10 items

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