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JSantini_S4_scaffold_1360

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_S4_scaffold_1360_1
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(3..353)
DNA (351bp) protein (117aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Ferroplasma RepID=S0AQF0_FERAC
Uncharacterized protein {ECO:0000313|EMBL:EQB74341.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
JSantini_S4_scaffold_1360_2
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(391..591)
DNA (201bp) protein (67aa)
snRNP Sm-like protein
SnRNP Sm-like protein n=2 Tax=Ferroplasma RepID=S0ASW8_FERAC
Uncharacterized protein {ECO:0000313|EMBL:EQB74340.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
JSantini_S4_scaffold_1360_3
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(616..774)
DNA (159bp) protein (53aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Ferroplasma RepID=S0AT09_FERAC
Uncharacterized protein {ECO:0000313|EMBL:EQB74339.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
JSantini_S4_scaffold_1360_4
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(758..1336)
DNA (579bp) protein (193aa)
exosome complex RNA-binding protein Csl4
Exosome complex RNA-binding protein Csl4 n=2 Tax=Ferroplasma RepID=S0APH0_FERAC
Exosome complex component Csl4 {ECO:0000256|HAMAP-Rule:MF_00975}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
JSantini_S4_scaffold_1360_5
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1446..2339)
DNA (894bp) protein (298aa)
protoheme IX farnesyltransferase
Protoheme IX farnesyltransferase n=2 Tax=Ferroplasma RepID=S0AQX2_FERAC
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
JSantini_S4_scaffold_1360_6
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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2696..2998
DNA (303bp) protein (101aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Ferroplasma RepID=S0AQE2_FERAC
Uncharacterized protein {ECO:0000313|EMBL:AGO61166.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_1360_7
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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2979..3596
DNA (618bp) protein (206aa)
ribosomal protein L11 methyltransferase
Ribosomal protein L11 methyltransferase n=2 Tax=Ferroplasma RepID=S0ASW2_FERAC
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:AGO61165.1}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
JSantini_S4_scaffold_1360_trna_1
unknown

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3639..3710
DNA (72bp)
transferRNA His
JSantini_S4_scaffold_1360_8
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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3845..4783
DNA (939bp) protein (313aa)
hypothetical protein
Probable deoxyhypusine synthase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AT04_FERAC
Probable deoxyhypusine synthase {ECO:0000256|HAMAP-Rule:MF_00153}; Short=DHS {ECO:0000256|HAMAP-Rule:MF_00153};; EC=2.5.1.46 {ECO:0000256|HAMAP-Rule:MF_00153};; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
Displaying 9 items

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