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JSantini_S4_scaffold_26

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Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_S4_scaffold_26_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..306)
DNA (306bp) protein (102aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNN2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDQ09861.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_26_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(303..887)
DNA (585bp) protein (195aa)
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTL3_9GAMM
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:CDQ09860.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_26_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(887..1468)
DNA (582bp) protein (194aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTL2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDQ09859.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_26_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2054..2374
DNA (321bp) protein (107aa)
integrase
Integrase family protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WNK0_BURSC
Integrase {ECO:0000313|EMBL:GAO36408.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
JSantini_S4_scaffold_26_5
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2687..3181
DNA (495bp) protein (165aa)
cytochrome c prime
Cytochrome c prime n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JRE0_9GAMM
Cytochrome c prime {ECO:0000313|EMBL:AEM46445.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_6
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3185..3859
DNA (675bp) protein (225aa)
nickel-dependent hydrogenase, b-type cytochrome subunit
Nickel-dependent hydrogenase, b-type cytochrome subunit n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JRD9_9GAMM
Nickel-dependent hydrogenase, b-type cytochrome subunit {ECO:0000313|EMBL:AEM46444.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_7
unknown

Not on your lists

comp(5009..5314)
DNA (306bp) protein (102aa)

This feature has no annotations

JSantini_S4_scaffold_26_8
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5361..6509
DNA (1149bp) protein (383aa)
filamentation induced by cAMP protein Fic
Filamentation induced by cAMP protein Fic n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JSB8_9GAMM
Adenosine monophosphate-protein transferase {ECO:0000256|PIRNR:PIRNR038925}; EC=2.7.7.n1 {ECO:0000256|PIRNR:PIRNR038925};; AMPylator {ECO:0000256|PIRNR:PIRNR038925}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_9
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6880..7086
DNA (207bp) protein (69aa)
phage transcriptional regulator, AlpA
Putative uncharacterized protein n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LDX7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDQ11529.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_26_trna_2
unknown

Not on your lists

comp(7262..7334)
DNA (73bp)
transferRNA Lys
JSantini_S4_scaffold_26_10
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7510..8901)
DNA (1392bp) protein (464aa)
oxygen-independent coproporphyrinogen III oxidase
Coproporphyrinogen-III oxidase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ73_9GAMM
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_11
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8939..9871)
DNA (933bp) protein (311aa)
LysR family transcriptional regulator
Transcriptional regulator, LysR family n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ74_9GAMM
HTH-type transcriptional regulator MetR {ECO:0000313|EMBL:CDQ11531.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_26_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10079..11473
DNA (1395bp) protein (465aa)
outer membrane porin
Outer membrane porin n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ75_9GAMM
Outer membrane porin {ECO:0000313|EMBL:CDQ11532.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_26_13
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11534..12616)
DNA (1083bp) protein (361aa)
lipopolysaccharide heptosyltransferase II
Lipopolysaccharide heptosyltransferase II n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ76_9GAMM
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:AEM46315.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_14
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12618..13382)
DNA (765bp) protein (255aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ77_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46316.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_15
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13386..14771)
DNA (1386bp) protein (462aa)
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ78_9GAMM
FAD linked oxidase domain protein {ECO:0000313|EMBL:AEM46317.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_16
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14768..15844)
DNA (1077bp) protein (359aa)
phosphoheptose isomerase
Phosphoheptose isomerase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ79_9GAMM
Phosphoheptose isomerase {ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|SAAS:SAAS00089180};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_26_17
unknown

Not on your lists

15934..16185
DNA (252bp) protein (84aa)

This feature has no annotations

JSantini_S4_scaffold_26_18
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16210..18054)
DNA (1845bp) protein (615aa)
lipoprotein
Lipoprotein, putative n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ81_9GAMM
Lipoprotein, putative {ECO:0000313|EMBL:AEM46320.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_19
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18082..18987
DNA (906bp) protein (302aa)
tetrapyrrole methylase family protein
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EKV9_ACIF5
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_26_trna_1
unknown

Not on your lists

19013..19085
DNA (73bp)
transferRNA Phe
JSantini_S4_scaffold_26_20
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19358..23332
DNA (3975bp) protein (1325aa)
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ88_9GAMM
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) {ECO:0000313|EMBL:AEM46327.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_21
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23386..24876)
DNA (1491bp) protein (497aa)
Rne/Rng family ribonuclease
Ribonuclease, Rne/Rng family n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ89_9GAMM
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:AEM46328.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_22
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24989..25882)
DNA (894bp) protein (298aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ91_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46330.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_23
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25879..26316)
DNA (438bp) protein (146aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ92_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDQ11549.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_26_24
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26324..26797)
DNA (474bp) protein (158aa)
ribosomal RNA large subunit methyltransferase H
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ93_9GAMM
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_26_25
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26804..27160)
DNA (357bp) protein (119aa)
iojap-like protein
Ribosomal silencing factor RsfS n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ94_9GAMM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_26
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27185..27841)
DNA (657bp) protein (219aa)
nicotinate-nucleotide adenylyltransferase
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ95_9GAMM
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_27
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27913..28620)
DNA (708bp) protein (236aa)
thiol:disulfide interchange protein DsbG
Thiol:disulfide interchange protein DsbG, putative n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ96_9GAMM
Thiol:disulfide interchange protein DsbG, putative {ECO:0000313|EMBL:AEM46335.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_26_28
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28792..29379
DNA (588bp) protein (196aa)
peptide methionine sulfoxide reductase msrA
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ97_9GAMM
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
Displaying items 1-30 of 52 in total

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