ggKbase home page

JSantini_S4_scaffold_130

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_S4_scaffold_130_1
unknown

Not on your lists

comp(70..246)
DNA (177bp) protein (59aa)

This feature has no annotations

JSantini_S4_scaffold_130_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

504..1163
DNA (660bp) protein (220aa)
transposase IS4 family protein
Transposase, IS4 family n=27 Tax=delta proteobacterium NaphS2 RepID=D8EWV2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CDQ10890.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_130_3
unknown

Not on your lists

comp(1403..1798)
DNA (396bp) protein (132aa)

This feature has no annotations

JSantini_S4_scaffold_130_4
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

2281..4941
DNA (2661bp) protein (887aa)
type III restriction protein res subunit
Type III restriction enzyme, res subunit n=4 Tax=Clostridium difficile RepID=T3SVD1_CLODI
Type III restriction protein res subunit {ECO:0000313|EMBL:ACD90412.1}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium limicola (strain DSM 245 / NBRC 103803).;"
JSantini_S4_scaffold_130_5
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4986..5912
DNA (927bp) protein (309aa)
DNA modification methylase
Modification methylase RsrI n=1 Tax=Rhodobacter sphaeroides RepID=MTR1_RHOSH
Modification methylase RsrI; Short=M.RsrI;; EC=2.1.1.72;; Adenine-specific methyltransferase RsrI; TaxID=1063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides).;"
JSantini_S4_scaffold_130_6
unknown

Not on your lists

comp(6078..6344)
DNA (267bp) protein (89aa)

This feature has no annotations

JSantini_S4_scaffold_130_7
Thermus scotoductus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

6558..11558
DNA (5001bp) protein (1667aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PNH2_THESS
Uncharacterized protein {ECO:0000313|EMBL:ADW21447.1}; TaxID=743525 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus scotoductus (strain ATCC 700910 / SA-01).;"
JSantini_S4_scaffold_130_8
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11770..12054
DNA (285bp) protein (95aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JRP7_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM47640.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_130_9
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12160..12420
DNA (261bp) protein (87aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JRP6_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM47639.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_130_10
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12417..12824
DNA (408bp) protein (136aa)
vapC2; nucleic acid-binding protein
PilT protein domain protein n=1 Tax=mine drainage metagenome RepID=T1CE08_9ZZZZ
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
JSantini_S4_scaffold_130_11
unknown

Not on your lists

12842..13039
DNA (198bp) protein (66aa)

This feature has no annotations

JSantini_S4_scaffold_130_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13082..13435)
DNA (354bp) protein (118aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQ35_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM48618.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_130_13
unknown

Not on your lists

comp(13557..13670)
DNA (114bp) protein (38aa)

This feature has no annotations

JSantini_S4_scaffold_130_14
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13810..14373)
DNA (564bp) protein (188aa)
hypothetical protein
Putative uncharacterized protein n=3 Tax=Acidithiobacillus RepID=B5ELR7_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:ACK78024.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_S4_scaffold_130_15
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14428..15027)
DNA (600bp) protein (200aa)
Thiol:disulfide interchange protein DsbG precursor
Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZM79_ACICS
Thiol:disulfide interchange protein DsbG {ECO:0000313|EMBL:AIA55595.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
JSantini_S4_scaffold_130_16
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15053..16906)
DNA (1854bp) protein (618aa)
cytochrome c biogenesis protein transmembrane region
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM07_9GAMM
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:AEM46957.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_130_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17007..17969)
DNA (963bp) protein (321aa)
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM08_9GAMM
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEM46958.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_130_18
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17963..18598)
DNA (636bp) protein (212aa)
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase sigma factor n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM09_9GAMM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_130_19
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18632..19096)
DNA (465bp) protein (155aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM10_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46960.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_130_20
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19129..19800)
DNA (672bp) protein (224aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM13_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46963.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_130_21
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19874..20017)
DNA (144bp) protein (48aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM14_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46964.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_130_22
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20253..21563)
DNA (1311bp) protein (437aa)
phosphate-selective porin O and P
Phosphate-selective porin O and P n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JU21_9GAMM
Phosphate-selective porin O and P {ECO:0000313|EMBL:AEM46773.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_130_23
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21718..22104)
DNA (387bp) protein (129aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM15_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46965.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
Displaying 23 items

View Taxonomy