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JSantini_S4_scaffold_144

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_S4_scaffold_144_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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191..1354
DNA (1164bp) protein (388aa)
TonB-dependent receptor
Dicitrate TonB-dependent receptor FecA1 n=1 Tax=Acidithiobacillus thiooxidans RepID=B7SUR0_ACITH
Dicitrate TonB-dependent receptor FecA1 {ECO:0000313|EMBL:CDQ12409.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_144_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1563..2807
DNA (1245bp) protein (415aa)
succinyldiaminopimelate transaminase
Succinyldiaminopimelate transaminase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM74_9GAMM
N-succinyl-L,L-diaminopimelate aminotransferase {ECO:0000313|EMBL:CDQ12408.1}; EC=2.6.1.17 {ECO:0000313|EMBL:CDQ12408.1};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_144_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2831..3655
DNA (825bp) protein (275aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM75_9GAMM
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_144_4
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3668..4816
DNA (1149bp) protein (383aa)
succinyl-diaminopimelate desuccinylase
Succinyl-diaminopimelate desuccinylase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM76_9GAMM
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_144_5
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4806..5630
DNA (825bp) protein (275aa)
rare lipoprotein A
Rare lipoprotein A n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM77_9GAMM
Rare lipoprotein A {ECO:0000313|EMBL:CDQ12405.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_144_6
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5643..6605
DNA (963bp) protein (321aa)
sulfotransferase
Sulfotransferase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM78_9GAMM
Sulfotransferase {ECO:0000313|EMBL:AEM48128.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_144_7
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6702..9113
DNA (2412bp) protein (804aa)
phosphoenolpyruvate synthase
Phosphoenolpyruvate synthase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM79_9GAMM
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_144_8
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9110..10645
DNA (1536bp) protein (512aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM80_9GAMM
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_144_9
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10642..11616
DNA (975bp) protein (325aa)
hypothetical protein
Catalytic domain-containing protein of components of various dehydrogenase complexes n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM81_9GAMM
Catalytic domain-containing protein of components of various dehydrogenase complexes {ECO:0000313|EMBL:AEM48131.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_144_10
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11619..12803
DNA (1185bp) protein (395aa)
acetate kinase
Acetate kinase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM82_9GAMM
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_144_11
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12800..14293
DNA (1494bp) protein (498aa)
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM83_9GAMM
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEM48133.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_144_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14320..15243
DNA (924bp) protein (308aa)
phosphate acetyl/butaryl transferase
Phosphate acetyl/butaryl transferase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM84_9GAMM
Phosphate acetyl/butaryl transferase {ECO:0000313|EMBL:AEM48134.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_144_13
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15240..16199
DNA (960bp) protein (320aa)
carbohydrate kinase, PfkB family
Phosphofructokinase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ES41_ACIF5
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_144_14
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16345..18060)
DNA (1716bp) protein (572aa)
pyruvate carboxyltransferase
2-isopropylmalate synthase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTG8_9GAMM
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_144_15

Not on your lists

18202..18687
DNA (486bp) protein (162aa)
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family n=3 Tax=root RepID=B5EJV0_ACIF5
DNA-binding transcriptional dual regulator,leucine-binding {ECO:0000313|EMBL:CBI05998.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_S4_scaffold_144_16
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18726..19358)
DNA (633bp) protein (211aa)
hypothetical protein
Conserved domain protein n=3 Tax=root RepID=B7J491_ACIF2
Uncharacterized protein {ECO:0000313|EMBL:ACH83898.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_S4_scaffold_144_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19355..19822)
DNA (468bp) protein (156aa)
MarR family transcriptional regulator
Transcriptional regulator, MarR family n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL13_9GAMM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEM48010.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_144_18
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19890..20369
DNA (480bp) protein (160aa)
AhpD family alkylhydroperoxidase-like protein
Alkylhydroperoxidase AhpD core n=1 Tax=mine drainage metagenome RepID=E6QFH7_9ZZZZ
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_144_19

Not on your lists

20366..20857
DNA (492bp) protein (164aa)
GNAT family acetyltransferase
GCN5-related N-acetyltransferase n=1 Tax=mine drainage metagenome RepID=E6QFH8_9ZZZZ
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CBI05969.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_S4_scaffold_144_20

Not on your lists

20903..21205
DNA (303bp) protein (101aa)
MarR family transcriptional regulator
Putative Transcriptional Regulator, MarR family n=1 Tax=mine drainage metagenome RepID=E6QDY2_9ZZZZ
Putative Transcriptional Regulator, MarR family {ECO:0000313|EMBL:CBI05408.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying 20 items

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