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JSantini_S4_scaffold_160

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_S4_scaffold_160_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..209
DNA (207bp) protein (69aa)
glycoside hydrolase family protein
Glycoside hydrolase family 8 n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JST7_9GAMM
Glycoside hydrolase family 8 {ECO:0000313|EMBL:AEM47732.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_160_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

255..1601
DNA (1347bp) protein (449aa)
diguanylate cyclase
Diguanylate cyclase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JST8_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:CDQ10220.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_160_3
unknown

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1598..1879
DNA (282bp) protein (94aa)

This feature has no annotations

JSantini_S4_scaffold_160_4
unknown

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1971..2366
DNA (396bp) protein (132aa)

This feature has no annotations

JSantini_S4_scaffold_160_5
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2509..4872)
DNA (2364bp) protein (788aa)
TonB-dependent receptor
TonB-dependent receptor n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMW5_9GAMM
Putative Porin {ECO:0000313|EMBL:CDQ12293.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_160_6
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5078..5770)
DNA (693bp) protein (231aa)
integral membrane protein
Integral membrane protein n=4 Tax=Acidithiobacillus RepID=B7J3P9_ACIF2
Integral membrane protein {ECO:0000313|EMBL:ACK80538.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_S4_scaffold_160_7
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5951..6982)
DNA (1032bp) protein (344aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMW7_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM48250.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_160_8
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7091..7765
DNA (675bp) protein (225aa)
two component heavy metal response winged helix family transcriptional regulator
Two component heavy metal response transcriptional regulator, winged helix family n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMW8_9GAMM
Transcriptional activator protein czcR {ECO:0000313|EMBL:CDQ12289.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_160_9
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7743..9185
DNA (1443bp) protein (481aa)
heavy metal sensor signal transduction histidine kinase
Heavy metal sensor signal transduction histidine kinase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMW9_9GAMM
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_160_10
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9363..10667
DNA (1305bp) protein (435aa)
outer membrane efflux protein
Outer membrane efflux protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMX0_9GAMM
Outer membrane efflux protein {ECO:0000313|EMBL:CDQ12287.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_160_11
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10664..11683
DNA (1020bp) protein (340aa)
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JN40_9GAMM
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:CDQ12286.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_160_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11680..14748
DNA (3069bp) protein (1023aa)
acriflavin resistance protein
Acriflavin resistance protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JN41_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:AEM48255.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_160_13
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14847..15896
DNA (1050bp) protein (350aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JN42_9GAMM
Putative permease {ECO:0000313|EMBL:CDQ12284.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_160_14
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15970..16185)
DNA (216bp) protein (72aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JN43_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM48257.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_160_15
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16565..16963
DNA (399bp) protein (133aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JRF7_9GAMM
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
JSantini_S4_scaffold_160_16
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17441..18724
DNA (1284bp) protein (428aa)
outer membrane efflux protein
Outer membrane efflux protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JN46_9GAMM
Outer membrane efflux protein {ECO:0000313|EMBL:AEM48260.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_160_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18721..20169
DNA (1449bp) protein (483aa)
RND family efflux transporter MFP subunit
RND transporter n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625242
Putative Heavy metal RND efflux membrane fusion protein, CzcB family (CusB or silB) {ECO:0000313|EMBL:CDQ11672.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_160_18
unknown

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20162..20239
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 18 items

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