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JSantini_S4_scaffold_221

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_S4_scaffold_221_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..165
DNA (165bp) protein (55aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Acidithiobacillus RepID=B7JAU0_ACIF2
Uncharacterized protein {ECO:0000313|EMBL:CDQ11109.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_221_trna_1
unknown

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comp(743..815)
DNA (73bp)
transferRNA Asn
JSantini_S4_scaffold_221_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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957..1541
DNA (585bp) protein (195aa)
NLP/P60 protein
NLP/P60 protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM68_9GAMM
NLP/P60 protein {ECO:0000313|EMBL:AEM48118.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_221_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1542..2726
DNA (1185bp) protein (395aa)
membrane-bound lytic murein transglycosylase B
Membrane-bound lytic murein transglycosylase B, putative n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM69_9GAMM
Membrane-bound lytic murein transglycosylase B, putative {ECO:0000313|EMBL:AEM48119.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_221_4
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2823..4169
DNA (1347bp) protein (449aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM70_9GAMM
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.31 {ECO:0000256|HAMAP-Rule:MF_01281};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_221_5
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4166..4873
DNA (708bp) protein (236aa)
3-demethylubiquinone-9 3-methyltransferase
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM71_9GAMM
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_221_6
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4845..5540
DNA (696bp) protein (232aa)
phosphoglycolate phosphatase
Phosphoglycolate phosphatase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM72_9GAMM
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_221_7
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5502..6389)
DNA (888bp) protein (296aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JM73_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM48123.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S4_scaffold_221_8
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6512..8398)
DNA (1887bp) protein (629aa)
ABC transporter permease/ATP-binding protein
multidrug ABC transporter ATP-binding protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624A71
Uncharacterized ABC transporter ATP-binding protein HI_1051 {ECO:0000313|EMBL:CDQ12430.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_221_9
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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9273..9644
DNA (372bp) protein (124aa)
hypothetical protein
Protein containing DUF891 n=1 Tax=mine drainage metagenome RepID=T1B3L6_9ZZZZ
Tax=RBG_16_Betaproteobacteria_58_11_curated
JSantini_S4_scaffold_221_10
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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9641..9970
DNA (330bp) protein (110aa)
XRE family transcriptional regulator
XRE family transcriptional regulator id=12495410 bin=THIO_HI species=Cupriavidus sp. UYPR2.512 genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=RBG_16_Betaproteobacteria_58_11_curated
JSantini_S4_scaffold_221_11
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10009..13119)
DNA (3111bp) protein (1037aa)
Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.2.1.88 1.5.5.2)
integrase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624C6E
Bifunctional protein putA: Proline dehydrogenase (Proline oxidase) Delta-1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase) {ECO:0000313|EMBL:CDQ12413.1}; EC=1.2.1.88 {ECO:0000313|EMBL:CDQ12413.1};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_221_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13139..13849)
DNA (711bp) protein (237aa)
TonB family protein
TonB system transport protein TonB1 n=1 Tax=Acidithiobacillus thiooxidans RepID=B7SUR4_ACITH
TonB system transport protein TonB1 {ECO:0000313|EMBL:CDQ12412.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_221_13
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13846..14247)
DNA (402bp) protein (134aa)
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZUA0_ACICS
Putative Biopolymer transport exbD protein {ECO:0000313|EMBL:CDQ12411.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_221_14
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14264..15031)
DNA (768bp) protein (256aa)
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZU99_ACICS
Putative MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:CDQ12410.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S4_scaffold_221_15
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16008..16781
DNA (774bp) protein (258aa)
TonB-dependent receptor
Dicitrate TonB-dependent receptor FecA1 n=1 Tax=Acidithiobacillus thiooxidans RepID=B7SUR0_ACITH
Dicitrate TonB-dependent receptor FecA1 {ECO:0000313|EMBL:CDQ12409.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
Displaying 16 items

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