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JSantini_S4_scaffold_28_29

Organism: Acidithiobacillus_ferrivorans_57_58

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(25160..26101)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 313.0
  • Bit_score: 565
  • Evalue 5.10e-159
RNA polymerase sigma factor RpoS n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JML5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 313.0
  • Bit_score: 565
  • Evalue 1.80e-158
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 313.0
  • Bit_score: 565
  • Evalue 2.50e-158

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Taxonomy

Acidithiobacillus ferrivorans → Acidithiobacillus → Acidithiobacillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGAAAAGCGCGAACAGGGACGAGGAAGCGGGCGTTCAGGCAGGAGCCTCGGAGAAGGAAGAGGATGTTCCGGAAAAAGCCGATTGGGTAGAAGATTTTGGTGAGGCCCATGATTGGGATGCTACCCGCTGCTATCTGCGGGAGATCGGGCATAGTCCGCTGCTGACGGCAGAACAGGAGGTCACCCTCGGACGCCGGGTTCAGGCCGGAGATCAGGCGGCACGCTGCACCATGATAGAGAGTAACCTGCGTCTGGTGGTAAAGGTGGCGCGGCGTTATATCAACCGGGGGTTGCCGCTCCTGGACCTGATCGAAGAAGGCAATCTCGGGCTGATCCGGGCGGTGGAGAAATTTGATCCGGAGCGCGGTTTTCGCTTTTCCACCTACGCGACCTGGTGGATTCGCCAGAATATTGAGCGGGCGCTGATGAATCAAACCCGCACCATCCGCCTGCCCATTCATGTCATGAAGGAACTCAGCGCCGTGCTGCGCGCGGCCCGCTGTCTCGGGCAAACCCTGCAGCGGGAGCCGACGCCGGAGGAGGTGGCGGAGGCTTTGGACCGCCCCGTAGACGCGGTGCGTGGCTGTCTGGAAATGGATGGCCGGATGACGAGCCTGGATGTGCCCCACGGCCGCGAGTCGGATCGTCCTCTTGCGGAAATTGTGGCCGATGTTGATGCGCTGGGCTTGGAAGAGGGCTTGGCCGATCGGGATCTCTCTCATCAGGTGCACCAGTGGATTGCAACCATGACCGAGAAGCATCGGCTGGTACTGCTCTGGCGTTTCGGGCTGGATGGTGCCGACGGGGCGACGCTGGAAGAGGTTGGTTCTCGCCTCGGCGTTACCCGGGAACGGGTGCGGCAGATTCAAGTAGAGGCCTTGCTGGTGCTGCGCCATCACATTGAAAGGGAAGGGCTGACGCCGGAGAGCCTCTTCGGCTGA
PROTEIN sequence
Length: 314
MKSANRDEEAGVQAGASEKEEDVPEKADWVEDFGEAHDWDATRCYLREIGHSPLLTAEQEVTLGRRVQAGDQAARCTMIESNLRLVVKVARRYINRGLPLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQNIERALMNQTRTIRLPIHVMKELSAVLRAARCLGQTLQREPTPEEVAEALDRPVDAVRGCLEMDGRMTSLDVPHGRESDRPLAEIVADVDALGLEEGLADRDLSHQVHQWIATMTEKHRLVLLWRFGLDGADGATLEEVGSRLGVTRERVRQIQVEALLVLRHHIEREGLTPESLFG*