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JSantini_S8_scaffold_174

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_S8_scaffold_174_1
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(166..1071)
DNA (906bp) protein (302aa)
LysR family transcriptional regulator
Transcriptional regulator, LysR family n=4 Tax=Acidithiobacillus RepID=B5EJV3_ACIF5
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACH83884.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_S8_scaffold_174_2

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1194..2399
DNA (1206bp) protein (402aa)
C4-dicarboxylate transporter/malic acid transport protein
Putative C4-dicarboxylate transporter/malic acid transport protein n=1 Tax=mine drainage metagenome RepID=E6QFF5_9ZZZZ
Putative C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:CBI05946.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_S8_scaffold_174_3
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2478..3761
DNA (1284bp) protein (428aa)
hypothetical protein
Outer membrane porin n=3 Tax=Acidithiobacillus RepID=B5EJV1_ACIF5
Outer membrane porin {ECO:0000313|EMBL:ACH83882.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_S8_scaffold_174_4
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3940..4425)
DNA (486bp) protein (162aa)
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTG7_9GAMM
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AEM47818.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S8_scaffold_174_5
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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4569..6272
DNA (1704bp) protein (568aa)
leuA-2; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=5 Tax=root RepID=B5EJU9_ACIF5
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_S8_scaffold_174_6
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6362..8845)
DNA (2484bp) protein (828aa)
cation-transporting P-type ATPase
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJU8_ACIF5
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:ACH83879.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_S8_scaffold_174_7
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8876..9649)
DNA (774bp) protein (258aa)
lpxH; UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
UDP-2,3-diacylglucosamine hydrolase n=4 Tax=root RepID=B5EJU7_ACIF5
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_S8_scaffold_174_8
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9654..10166)
DNA (513bp) protein (171aa)
ppiB; peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=4 Tax=root RepID=B5EJU6_ACIF5
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_S8_scaffold_174_9
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10889..11095
DNA (207bp) protein (69aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Acidithiobacillus RepID=B5EJU2_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:ACH83873.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_S8_scaffold_174_10
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11254..11700
DNA (447bp) protein (149aa)
hypothetical protein
Uncharacterized protein n=4 Tax=root RepID=E6QFJ7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ACH83872.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_S8_scaffold_174_11
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11740..13182
DNA (1443bp) protein (481aa)
PQQ enzyme repeat protein
PQQ enzyme repeat protein n=3 Tax=Acidithiobacillus RepID=B7JC76_ACIF2
PQQ enzyme repeat protein {ECO:0000313|EMBL:ACK79675.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_S8_scaffold_174_12
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13428..14768)
DNA (1341bp) protein (447aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=3 Tax=root RepID=B5EJT9_ACIF5
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_S8_scaffold_174_13
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14924..15295
DNA (372bp) protein (124aa)
thioredoxin
Thioredoxin n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJT8_ACIF5
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_S8_scaffold_174_14
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15351..16181)
DNA (831bp) protein (277aa)
TonB family protein
TonB family protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJT7_ACIF5
TonB family protein {ECO:0000313|EMBL:ACH83868.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_S8_scaffold_174_15

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comp(16302..17750)
DNA (1449bp) protein (483aa)
fosmidomycin resistance protein
Fosmidomycin resistance protein n=1 Tax=mine drainage metagenome RepID=E6QFM0_9ZZZZ
Fosmidomycin resistance protein {ECO:0000313|EMBL:CBI06015.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying 15 items

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