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JSantini_S8_scaffold_292

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_S8_scaffold_292_1
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..748)
DNA (747bp) protein (249aa)
Tn7-like transposition protein B
Tn7-like transposition protein B n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EKL7_ACIF5
Tn7-like transposition protein B {ECO:0000313|EMBL:ACH82479.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_S8_scaffold_292_2
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(745..1245)
DNA (501bp) protein (167aa)
merA; mercuric reductase (EC:1.16.1.1)
Mercuric reductase n=2 Tax=Acidithiobacillus RepID=B7J717_ACIF2
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_S8_scaffold_292_3
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1269..1526
DNA (258bp) protein (86aa)
putative transcriptional regulator MerR
MerR family transcriptional regulator n=1 Tax=Gluconacetobacter europaeus RepID=UPI00037B20AF
MerR family transcriptional regulator {ECO:0000313|EMBL:KGM53250.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
JSantini_S8_scaffold_292_4
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1757..3163
DNA (1407bp) protein (469aa)
glucose-6-phosphate 1-dehydrogenase
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JLE2_9GAMM
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S8_scaffold_292_5

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comp(4116..4484)
DNA (369bp) protein (123aa)
hypothetical protein
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QJH7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI07393.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_S8_scaffold_292_6

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comp(4481..4756)
DNA (276bp) protein (92aa)
hypothetical protein
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QJH6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI07392.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_S8_scaffold_292_7

Not on your lists

4798..5562
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QCG5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI04891.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_S8_scaffold_292_8
unknown

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5601..5900
DNA (300bp) protein (100aa)

This feature has no annotations

JSantini_S8_scaffold_292_9

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comp(6673..6999)
DNA (327bp) protein (109aa)
ISAtfe-like protein
Transposase od ISCARN13, ISL3 family n=1 Tax=mine drainage metagenome RepID=E6Q8X4_9ZZZZ
Transposase od ISCARN13, ISL3 family {ECO:0000313|EMBL:CBI03650.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_S8_scaffold_292_10
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6996..7526)
DNA (531bp) protein (177aa)
DedA family membrane protein
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QAA2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDQ12037.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S8_scaffold_292_11
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7526..7780)
DNA (255bp) protein (85aa)
Rhodopsin
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QAA1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDQ12038.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S8_scaffold_292_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7735..8181)
DNA (447bp) protein (149aa)
hypothetical protein
Uncharacterized protein n=4 Tax=root RepID=E6QFA1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDQ12039.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S8_scaffold_292_13
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8191..8598)
DNA (408bp) protein (136aa)
nucleic acid-binding protein, contains PIN domain
twitching motility protein PilT n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624E82
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S8_scaffold_292_14
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8595..8819)
DNA (225bp) protein (75aa)
AbrB family DNA-binding protein
AbrB family transcriptional regulator n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624E83
Transcriptional regulator, AbrB family protein {ECO:0000313|EMBL:CDQ12041.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S8_scaffold_292_15
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8962..9294
DNA (333bp) protein (111aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JT93_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46647.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S8_scaffold_292_16
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9304..9579)
DNA (276bp) protein (92aa)
transposase of ISThsp20, IS5 family IS427 group, ORFB
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E9FD0
Transposase {ECO:0000313|EMBL:CDW96213.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
JSantini_S8_scaffold_292_17
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9594..10067)
DNA (474bp) protein (158aa)
transposase of ISThsp20, IS5 family IS427 group , ORFA
Transposase of ISThsp20, IS5 family IS427 group , ORFA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CME0_THIA3
Transposase of ISThsp20, IS5 family IS427 group , ORFA {ECO:0000313|EMBL:CAZ89718.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
JSantini_S8_scaffold_292_18
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10152..10415
DNA (264bp) protein (88aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JT94_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46648.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_S8_scaffold_292_19
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10541..10834)
DNA (294bp) protein (98aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTW1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AIA54065.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
JSantini_S8_scaffold_292_20
unknown

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11015..11293
DNA (279bp) protein (93aa)

This feature has no annotations

JSantini_S8_scaffold_292_21
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11307..11669
DNA (363bp) protein (121aa)
RNA-directed DNA polymerase
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JLX3_9GAMM
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:CDQ09355.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_S8_scaffold_292_22
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12227..12928
DNA (702bp) protein (234aa)
RNA-directed DNA polymerase
hypothetical protein n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00036E9D43
Transposase {ECO:0000313|EMBL:KDP88232.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
Displaying 22 items

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