ggKbase home page

JSantini_SS8_scaffold_244

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_SS8_scaffold_244_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..189
DNA (189bp) protein (63aa)
Smr protein/MutS2
DNA mismatch repair protein MutS n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026254C2
Smr protein/MutS2 {ECO:0000313|EMBL:AEM48170.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_244_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195..836
DNA (642bp) protein (214aa)
class II aldolase/adducin family protein
aldolase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026254C3
Class II aldolase/adducin family protein {ECO:0000313|EMBL:CDQ12352.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_SS8_scaffold_244_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(809..1471)
DNA (663bp) protein (221aa)
exonuclease RNase T and DNA polymerase III
exodeoxyribonuclease X n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026254C4
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:AEM48172.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_244_4
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1694..2389
DNA (696bp) protein (232aa)
hypothetical protein
transporter n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026254C5
Membrane protein, putative {ECO:0000313|EMBL:ACK79990.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_SS8_scaffold_244_5
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2511..5072
DNA (2562bp) protein (854aa)
DNA mismatch repair protein mutS
DNA mismatch repair protein MutS n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMC4_9GAMM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_244_6
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5681..6295
DNA (615bp) protein (205aa)
hypothetical protein
secreted protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026254C6
Secreted protein {ECO:0000313|EMBL:AEK57446.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_SS8_scaffold_244_7
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6308..6922
DNA (615bp) protein (205aa)
cobyrinic acid a,c-diamide synthase
cobyrinic acid ac-diamide synthase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026254C7
Chromosome partitioning protein {ECO:0000313|EMBL:AKH20442.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
JSantini_SS8_scaffold_244_8
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6957..7652
DNA (696bp) protein (232aa)
hypothetical protein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026254C8
Uncharacterized protein {ECO:0000313|EMBL:AIA54653.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
JSantini_SS8_scaffold_244_9
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7712..8746
DNA (1035bp) protein (345aa)
dihydroorotase
dihydroorotase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026254C9
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_244_10
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8781..9866)
DNA (1086bp) protein (362aa)
NADH:flavin oxidoreductase/NADH oxidase
NADH:flavin oxidoreductase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026254CA
N-ethylmaleimide reductase {ECO:0000313|EMBL:EXI88731.1}; EC=1.-.-.- {ECO:0000313|EMBL:EXI88731.1};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
JSantini_SS8_scaffold_244_trna_1
unknown

Not on your lists

10241..10322
DNA (82bp)
transferRNA Leu
JSantini_SS8_scaffold_244_11
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10350..11099
DNA (750bp) protein (250aa)
Hemerythrin HHE cation binding domain-containing protein
cation-binding protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624A8D
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:CDQ10060.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_SS8_scaffold_244_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11113..12024)
DNA (912bp) protein (304aa)
phosphate ABC transporter permease
phosphate ABC transporter permease n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624A8E
Phosphate ABC transporter, inner membrane subunit PstA {ECO:0000313|EMBL:AEM47667.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_244_13
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12024..12980)
DNA (957bp) protein (319aa)
phosphate ABC transporter permease
phosphate ABC transporter permease n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624A8F
Phosphate ABC transporter, inner membrane subunit PstC {ECO:0000313|EMBL:AEM47666.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_244_14
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13084..14169)
DNA (1086bp) protein (362aa)
phosphate ABC transporter substrate-binding protein
phosphate-binding protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624A90
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_SS8_scaffold_244_15
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14377..14577)
DNA (201bp) protein (67aa)
hypothetical protein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624A91
Putative uncharacterized protein {ECO:0000313|EMBL:AEM47664.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_244_16
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14656..15147)
DNA (492bp) protein (164aa)
phosphohistidine phosphatase SixA
phosphohistidine phosphatase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624A92
Phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:AEM47663.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_244_17

Not on your lists

comp(15119..15535)
DNA (417bp) protein (139aa)
hypothetical protein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624A93
Uncharacterized protein {ECO:0000313|EMBL:CBI04083.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_SS8_scaffold_244_18
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15536..16045)
DNA (510bp) protein (170aa)
GTP-binding protein engA
GTP-binding protein Der n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624A94
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
Displaying 19 items

View Taxonomy