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JSantini_SS8_scaffold_257

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_SS8_scaffold_257_1
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1..351
DNA (351bp) protein (117aa)
diguanylate cyclase/phosphodiesterase
cyclic diguanylate phosphodiesterase domain-containing protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252BB
Diguanylate cyclase/phosphodiesterase with GAF sensor {ECO:0000313|EMBL:EES53677.1}; TaxID=412449 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;"
JSantini_SS8_scaffold_257_2
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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421..1215
DNA (795bp) protein (265aa)
hypothetical protein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252BA
Uncharacterized protein {ECO:0000313|EMBL:AEK58055.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_SS8_scaffold_257_3
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1244..2392
DNA (1149bp) protein (383aa)
hypothetical protein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252B9
Uncharacterized protein {ECO:0000313|EMBL:AEK58057.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_SS8_scaffold_257_4
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2385..2642
DNA (258bp) protein (86aa)
flhB; flagellar biosynthetic protein
flagellar biosynthesis protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252B8
Uncharacterized protein {ECO:0000313|EMBL:EJN08290.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
JSantini_SS8_scaffold_257_5
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2696..3496
DNA (801bp) protein (267aa)
acyltransferase
acyltransferase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252B7
Acyltransferase {ECO:0000313|EMBL:AEK58209.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_SS8_scaffold_257_6
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3523..5652
DNA (2130bp) protein (710aa)
Acyltransferase
acyltransferase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252B6
Acyltransferase {ECO:0000313|EMBL:AIA55198.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
JSantini_SS8_scaffold_257_7
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5664..6323)
DNA (660bp) protein (220aa)
High frequency lysogenization protein hflD
lysogenization protein HflD n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252B5
High frequency lysogenization protein HflD homolog {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_257_8
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6356..8953)
DNA (2598bp) protein (866aa)
UTP-GlnB uridylyltransferase, GlnD
protein-P-II uridylyltransferase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252B4
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_SS8_scaffold_257_9
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8956..9765)
DNA (810bp) protein (270aa)
methionine aminopeptidase, type I
methionine aminopeptidase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252B3
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_SS8_scaffold_257_10
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9794..10492)
DNA (699bp) protein (233aa)
sfsA; sugar fermentation stimulation protein
XRE family transcriptional regulator n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252B2
Sugar fermentation stimulation protein homolog {ECO:0000255|HAMAP-Rule:MF_00095}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_SS8_scaffold_257_11
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10569..11468)
DNA (900bp) protein (300aa)
glutamate--tRNA ligase (EC:6.1.1.17)
glutamyl-tRNA synthetase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252B1
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|SAAS:SAAS00018238}; EC=6.1.1.- {ECO:0000256|SAAS:SAAS00018222};; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_SS8_scaffold_257_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11650..12672
DNA (1023bp) protein (341aa)
thiamine-monophosphate kinase
thiamine-monophosphate kinase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252AE
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_SS8_scaffold_257_13
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12662..13150
DNA (489bp) protein (163aa)
phosphatidylglycerophosphatase A
phosphatidylglycerophosphatase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252AD
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_257_14
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13147..14058
DNA (912bp) protein (304aa)
CinA domain-containing protein
competence damage-inducible protein A n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252AC
CinA domain protein {ECO:0000313|EMBL:AEM47961.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
Displaying 14 items

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