ggKbase home page

JSantini_SS8_scaffold_396

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_SS8_scaffold_396_1
Acidithiobacillus thiooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80..1312
DNA (1233bp) protein (411aa)
TonB-dependent receptor
TonB-dependent outer membrane receptor FecA3 n=2 Tax=Acidithiobacillus thiooxidans RepID=B7SUS0_ACITH
TonB-dependent outer membrane receptor FecA3 {ECO:0000313|EMBL:ACI62882.1}; TaxID=930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus thiooxidans (Thiobacillus thiooxidans).;"
JSantini_SS8_scaffold_396_2
Acidithiobacillus thiooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1380..2057
DNA (678bp) protein (226aa)
MotA/TolQ/ExbB proton channel family protein
TonB system transport protein ExbB2 n=1 Tax=Acidithiobacillus thiooxidans RepID=B7SUS1_ACITH
TonB system transport protein ExbB2 {ECO:0000313|EMBL:ACI62883.1}; TaxID=930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus thiooxidans (Thiobacillus thiooxidans).;"
JSantini_SS8_scaffold_396_3
Acidithiobacillus thiooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2061..2456
DNA (396bp) protein (132aa)
biopolymer transport protein ExbD/TolR
TonB system transport protein ExbD2 n=1 Tax=Acidithiobacillus thiooxidans RepID=B7SUS2_ACITH
TonB system transport protein ExbD2 {ECO:0000313|EMBL:ACI62884.1}; TaxID=930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus thiooxidans (Thiobacillus thiooxidans).;"
JSantini_SS8_scaffold_396_4
Acidithiobacillus thiooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2453..3169
DNA (717bp) protein (239aa)
ferric siderophore transport system, periplasmic binding protein TonB
TonB system transport protein TonB3 n=2 Tax=Acidithiobacillus thiooxidans RepID=B7SUS3_ACITH
TonB system transport protein TonB3 {ECO:0000313|EMBL:ACI62885.1}; TaxID=930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus thiooxidans (Thiobacillus thiooxidans).;"
JSantini_SS8_scaffold_396_5
Acidithiobacillus thiooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3268..4647
DNA (1380bp) protein (460aa)
putative Metallo-dependent phosphatase
Alkaline phosphatase D n=1 Tax=Acidithiobacillus thiooxidans RepID=B7SUS4_ACITH
Alkaline phosphatase D {ECO:0000313|EMBL:ACI62886.1}; TaxID=930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus thiooxidans (Thiobacillus thiooxidans).;"
JSantini_SS8_scaffold_396_6
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4750..6045)
DNA (1296bp) protein (432aa)
integral membrane sensor signal transduction histidine kinase
histidine kinase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624C60
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_SS8_scaffold_396_7
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6042..6725)
DNA (684bp) protein (228aa)
DNA-binding response regulator
transcriptional regulator n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624C5F
DNA-binding response regulator {ECO:0000313|EMBL:EGQ62823.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_SS8_scaffold_396_8
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7258..7821
DNA (564bp) protein (188aa)
oligoribonuclease
oligoribonuclease n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624C5E
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_SS8_scaffold_396_9
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7828..8076)
DNA (249bp) protein (83aa)
hypothetical protein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624C5D
Uncharacterized protein {ECO:0000313|EMBL:AEK57320.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
JSantini_SS8_scaffold_396_10
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8092..9177
DNA (1086bp) protein (362aa)
Luciferase-like, subgroup
monooxygenase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624C5C
Luciferase-like, subgroup {ECO:0000313|EMBL:AEM47225.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_396_11
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9177..10013
DNA (837bp) protein (279aa)
NAD-dependent epimerase/dehydratase
epimerase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624C5B
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACH84178.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_SS8_scaffold_396_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10010..10705
DNA (696bp) protein (232aa)
hypothetical protein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624C5A
Putative uncharacterized protein {ECO:0000313|EMBL:AEM47223.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_396_13
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10736..11017
DNA (282bp) protein (94aa)
plasmid-like protein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624C59
Plasmid related protein {ECO:0000313|EMBL:CDQ11168.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_SS8_scaffold_396_14
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11026..12657
DNA (1632bp) protein (544aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
phosphoglucomutase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624C58
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:AEM47221.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_396_15
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12673..13032
DNA (360bp) protein (120aa)
hypothetical protein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624C57
Uncharacterized protein {ECO:0000313|EMBL:CDQ11166.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_SS8_scaffold_396_trna_1
unknown

Not on your lists

13067..13140
DNA (74bp)
transferRNA Pro
Displaying 16 items

View Taxonomy