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JSantini_SS8_scaffold_540

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_SS8_scaffold_540_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..269
DNA (267bp) protein (89aa)
UDP-N-acetylmuramate--L-alanine ligase
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624AC2
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_540_2
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

266..1153
DNA (888bp) protein (296aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624AC1
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_SS8_scaffold_540_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1146..1901
DNA (756bp) protein (252aa)
D-alanine--D-alanine ligase
D-alanine--D-alanine ligase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624AC0
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_540_4
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1905..2759
DNA (855bp) protein (285aa)
cell division protein FtsQ
cell division protein FtsQ n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624ABF
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_SS8_scaffold_540_5
Desulfovibrio piezophilus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2733..3173)
DNA (441bp) protein (147aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) RepID=M1WQ95_DESPC
Uncharacterized protein {ECO:0000313|EMBL:CCH48839.1}; TaxID=1322246 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30).;"
JSantini_SS8_scaffold_540_6
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3217..3924
DNA (708bp) protein (236aa)
ftsA; cell division protein FtsA
cell division protein FtsA n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624ABE
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_SS8_scaffold_540_7
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3966..4184
DNA (219bp) protein (73aa)
ftsZ; cell division protein FtsZ
peptidase M23 n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624ABD
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_SS8_scaffold_540_8
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4172..4972
DNA (801bp) protein (267aa)
cell division protein FtsZ
peptidase M23 n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624ABD
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_540_9
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4989..5414)
DNA (426bp) protein (142aa)
leucine-rich repeat-containing protein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624ABC
Leucine-rich repeat-containing protein {ECO:0000313|EMBL:AEM48901.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_540_10
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5433..6290)
DNA (858bp) protein (286aa)
hypothetical protein
ferritin n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624ABB
Putative uncharacterized protein {ECO:0000313|EMBL:AEM48902.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_540_11
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6525..6983
DNA (459bp) protein (153aa)
3-dehydroquinate dehydratase
3-dehydroquinate dehydratase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624ABA
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_540_12
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7003..7470
DNA (468bp) protein (156aa)
accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein
acetyl-CoA carboxylase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624AB9
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:ACK77865.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_SS8_scaffold_540_13
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7472..8818
DNA (1347bp) protein (449aa)
acetyl-CoA carboxylase, biotin carboxylase
acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624AB8
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:AEM48905.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_540_14
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8815..9693
DNA (879bp) protein (293aa)
50S ribosomal protein L11 methyltransferase
ribosomal protein L11 methyltransferase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624AB7
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_SS8_scaffold_540_15
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9697..10329
DNA (633bp) protein (211aa)
MJ0042 family finger-like domain-containing protein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624AB6
MJ0042 family finger-like domain protein {ECO:0000313|EMBL:ACK78799.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_SS8_scaffold_540_16
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10341..10583
DNA (243bp) protein (81aa)
Fis family transcriptional regulator
Fis family transcriptional regulator n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026254F5
Transcriptional regulator, Fis family {ECO:0000313|EMBL:AEM48908.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_540_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10565..11245)
DNA (681bp) protein (227aa)
lytic transglycosylase
transglycosylase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026254F4
Lytic transglycosylase catalytic {ECO:0000313|EMBL:AEM48909.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_SS8_scaffold_540_18
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11242..11676)
DNA (435bp) protein (145aa)
Stringent starvation protein B
starvation protein B n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026254F3
Stringent starvation protein B {ECO:0000313|EMBL:AEM48910.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
Displaying 18 items

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