ggKbase home page

L1_007_000G1_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 331 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_13_1
unknown

Not on your lists

1..111
DNA (111bp) protein (37aa)

This feature has no annotations

L1_007_000G1_scaffold_13_2
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

114..986
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BRQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58163.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_007_000G1_scaffold_13_3
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1027..2970
DNA (1944bp) protein (648aa)
pullulanase, type I (EC:3.2.1.41)
Pullulanase, type I n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CNL8_9CLOT
Pullulanase, type I {ECO:0000313|EMBL:ERI70822.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L1_007_000G1_scaffold_13_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2933..4903
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YMX5_9FIRM
Putative glycogen debranching enzyme, archaeal type {ECO:0000313|EMBL:EEA82898.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
glycogen debranching protein
L1_007_000G1_scaffold_13_5
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4930..7188
DNA (2259bp) protein (753aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Phosphorylase n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RWR7_9FIRM
glycogen/starch/alpha-glucan phosphorylase
L1_007_000G1_scaffold_13_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7218..8672
DNA (1455bp) protein (485aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UI34_9FIRM
L1_007_000G1_scaffold_13_7
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8679..10433
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WSN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05605.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
glycosidase
L1_007_000G1_scaffold_13_8
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10561..11235
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MF81_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDR97186.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000G1_scaffold_13_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11223..12437
DNA (1215bp) protein (405aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Uncharacterized protein n=2 Tax=Clostridiales RepID=V8C8M4_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L1_007_000G1_scaffold_13_10
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12516..13565
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BFV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI70738.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L1_007_000G1_scaffold_13_11
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13562..14218
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CNE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI70737.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L1_007_000G1_scaffold_13_12
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14215..15096
DNA (882bp) protein (294aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CTZ6_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI70736.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ABC-type multidrug transport system, ATPase component
L1_007_000G1_scaffold_13_13
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15176..16081)
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JL15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30992.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L1_007_000G1_scaffold_13_14
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16352..17656
DNA (1305bp) protein (435aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9ML02_9FIRM
L1_007_000G1_scaffold_13_15
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17761..18003
DNA (243bp) protein (81aa)
Preprotein translocase, SecG subunit n=1 Tax=Dorea sp. 5-2 RepID=R9NDZ2_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EOS81525.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
protein translocase, SecG subunit
L1_007_000G1_scaffold_13_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18182..20329
DNA (2148bp) protein (716aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Ribonuclease R n=2 Tax=Clostridium RepID=B6FVC7_9CLOT
ribonuclease R
L1_007_000G1_scaffold_13_17
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20333..20803
DNA (471bp) protein (157aa)
SsrA-binding protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB62_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
SsrA-binding protein
L1_007_000G1_scaffold_13_18
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20834..21076
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NKH7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39303.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_000G1_scaffold_13_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21104..21940
DNA (837bp) protein (279aa)
Esterase/lipase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N8S0_9FIRM
Esterase/lipase {ECO:0000313|EMBL:CCY98269.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Esterase/lipase
L1_007_000G1_scaffold_13_20
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22666..23226
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B7A458
Uncharacterized protein {ECO:0000313|EMBL:EGW41371.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
hypothetical protein
L1_007_000G1_scaffold_13_21
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23361..24068
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KNH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33928.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_000G1_scaffold_13_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24065..25378
DNA (1314bp) protein (438aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KN23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33927.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
virS; sensor histidine kinase VirS
L1_007_000G1_scaffold_13_23
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25482..26309
DNA (828bp) protein (276aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NE03_CLOSV
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS07021.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_007_000G1_scaffold_13_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26324..28921
DNA (2598bp) protein (866aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FGF7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN33838.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_000G1_scaffold_13_25
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28938..29360
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33837.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_000G1_scaffold_13_26
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29969..30151
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LAQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET62034.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L1_007_000G1_scaffold_13_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30304..30495
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z819_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42345.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L1_007_000G1_scaffold_13_28
unknown

Not on your lists

30492..30617
DNA (126bp) protein (42aa)

This feature has no annotations

L1_007_000G1_scaffold_13_29
unknown

Not on your lists

30792..31010
DNA (219bp) protein (73aa)

This feature has no annotations

L1_007_000G1_scaffold_13_30
unknown

Not on your lists

comp(30957..32315)
DNA (1359bp) protein (453aa)

This feature has no annotations

Displaying items 1-30 of 331 in total

View Taxonomy