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L1_007_000G1_scaffold_31

Search features with annotation key words

Displaying items 1-30 of 207 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_31_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(396..1301)
DNA (906bp) protein (302aa)
UPI0003D66D60 related cluster n=1 Tax=unknown RepID=UPI0003D66D60
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ETI82944.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
lipase/esterase
L1_007_000G1_scaffold_31_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1324..2136)
DNA (813bp) protein (271aa)
UPI0003D5F671 related cluster n=1 Tax=unknown RepID=UPI0003D5F671
Uncharacterized protein {ECO:0000313|EMBL:ETI82943.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
alpha/beta hydrolase
L1_007_000G1_scaffold_31_3
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(2554..3414)
DNA (861bp) protein (287aa)
Putative peptide ABC transport ATP-binding protein {ECO:0000313|EMBL:CRH87648.1}; EC=3.6.3.- {ECO:0000313|EMBL:CRH87648.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZDG2_9ACTO
ABC transporter
L1_007_000G1_scaffold_31_4
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3417..5483)
DNA (2067bp) protein (689aa)
Putative peptide ABC transport ATP-binding protein {ECO:0000313|EMBL:CRH87649.1}; EC=3.6.3.- {ECO:0000313|EMBL:CRH87649.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
ABC transporter, ATP-binding protein n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YQU0_9ACTO
oligopeptide/dipeptide ABC transporter ATPase
L1_007_000G1_scaffold_31_5
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(5489..6481)
DNA (993bp) protein (331aa)
ABC transporter, permease protein n=4 Tax=Mobiluncus mulieris RepID=C2KQM9_9ACTO
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:CRH87650.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
ABC transporter permease
L1_007_000G1_scaffold_31_6
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(6602..8197)
DNA (1596bp) protein (532aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YQU2_9ACTO
Membrane transport protein%2C solute-binding component {ECO:0000313|EMBL:CRH87651.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
ABC transporter substrate-binding protein
L1_007_000G1_scaffold_31_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8488..9258
DNA (771bp) protein (257aa)
UPI0003D630AD related cluster n=1 Tax=unknown RepID=UPI0003D630AD
Regulatory protein GntR HTH {ECO:0000313|EMBL:ETI82941.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
regulatory protein GntR HTH
L1_007_000G1_scaffold_31_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9312..10118)
DNA (807bp) protein (269aa)
UPI0003D62782 related cluster n=1 Tax=unknown RepID=UPI0003D62782
Hydrolase, alpha/beta protein {ECO:0000313|EMBL:ETI82940.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Hydrolase
L1_007_000G1_scaffold_31_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10589..11506
DNA (918bp) protein (306aa)
UPI0003D61CDE related cluster n=1 Tax=unknown RepID=UPI0003D61CDE
Uncharacterized protein {ECO:0000313|EMBL:ETI82938.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
dihydrodipicolinate synthetase
L1_007_000G1_scaffold_31_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11503..12441
DNA (939bp) protein (313aa)
UPI0003D67E82 related cluster n=1 Tax=unknown RepID=UPI0003D67E82
Glucokinase {ECO:0000313|EMBL:ETI82937.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_31_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12444..13118
DNA (675bp) protein (225aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D6541A related cluster n=1 Tax=unknown RepID=UPI0003D6541A
N-acetylmannosamine-6-phosphate 2-epimerase
L1_007_000G1_scaffold_31_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13332..18839)
DNA (5508bp) protein (1836aa)
UPI0003D6621A related cluster n=1 Tax=unknown RepID=UPI0003D6621A
Uncharacterized protein {ECO:0000313|EMBL:ETI82935.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
carbohydrate-binding protein
L1_007_000G1_scaffold_31_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18876..24386)
DNA (5511bp) protein (1837aa)
UPI0003D5A161 related cluster n=1 Tax=unknown RepID=UPI0003D5A161
Uncharacterized protein {ECO:0000313|EMBL:ETI82934.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
glycosyl hydrolase family 20
L1_007_000G1_scaffold_31_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24580..31440)
DNA (6861bp) protein (2287aa)
UPI0003D637EF related cluster n=1 Tax=unknown RepID=UPI0003D637EF
Uncharacterized protein {ECO:0000313|EMBL:ETI82933.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
nagZ; beta_N-acetylhexosaminidase
L1_007_000G1_scaffold_31_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31516..35694)
DNA (4179bp) protein (1393aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
UPI0003D60F98 related cluster n=1 Tax=unknown RepID=UPI0003D60F98
Uncharacterized protein {ECO:0000313|EMBL:ETI82932.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_000G1_scaffold_31_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35820..39077)
DNA (3258bp) protein (1086aa)
UPI0003D622A8 related cluster n=1 Tax=unknown RepID=UPI0003D622A8
Uncharacterized protein {ECO:0000313|EMBL:ETI82931.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
alpha-L-fucosidase
L1_007_000G1_scaffold_31_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39280..40287)
DNA (1008bp) protein (336aa)
UPI0003D6398A related cluster n=1 Tax=unknown RepID=UPI0003D6398A
Aldose epimerase {ECO:0000313|EMBL:ETI82930.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
aldose epimerase
L1_007_000G1_scaffold_31_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(40381..43278)
DNA (2898bp) protein (966aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
leuS; leucine--tRNA ligase (EC:6.1.1.4)
UPI0003D6784B related cluster n=1 Tax=unknown RepID=UPI0003D6784B
L1_007_000G1_scaffold_31_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43421..44308)
DNA (888bp) protein (296aa)
UPI0003D64C8A related cluster n=1 Tax=unknown RepID=UPI0003D64C8A
Cell division protein FtsQ, nonfunctional {ECO:0000313|EMBL:ETI82928.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ftsQ; cell division protein FtsQ
L1_007_000G1_scaffold_31_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44305..45711)
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Varibaculum cambriense RepID=UPI0003B331CD
UDP-N-acetylmuramate-L-alanine ligase {ECO:0000313|EMBL:ETI82926.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UDP-N-acetylmuramate--alanine ligase
L1_007_000G1_scaffold_31_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45708..46829)
DNA (1122bp) protein (374aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D68B07 related cluster n=1 Tax=unknown RepID=UPI0003D68B07
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
L1_007_000G1_scaffold_31_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46816..48165)
DNA (1350bp) protein (450aa)
UPI0003D628C8 related cluster n=1 Tax=unknown RepID=UPI0003D628C8
Uncharacterized protein {ECO:0000313|EMBL:ETI82924.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
spoVE; stage V sporulation protein E
L1_007_000G1_scaffold_31_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48168..49607)
DNA (1440bp) protein (480aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D63D9E related cluster n=1 Tax=unknown RepID=UPI0003D63D9E
UDP-N-acetylmuramoylalanine--D-glutamate ligase
L1_007_000G1_scaffold_31_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49604..50716)
DNA (1113bp) protein (371aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
UPI0003D60816 related cluster n=1 Tax=unknown RepID=UPI0003D60816
L1_007_000G1_scaffold_31_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50716..52245)
DNA (1530bp) protein (510aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D6752B related cluster n=1 Tax=unknown RepID=UPI0003D6752B
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
L1_007_000G1_scaffold_31_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52285..54231)
DNA (1947bp) protein (649aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
UPI0003D5A93E related cluster n=1 Tax=unknown RepID=UPI0003D5A93E
Uncharacterized protein {ECO:0000313|EMBL:ETI82920.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L1_007_000G1_scaffold_31_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54241..54663)
DNA (423bp) protein (141aa)
UPI0003D66719 related cluster n=1 Tax=unknown RepID=UPI0003D66719
Uncharacterized protein {ECO:0000313|EMBL:ETI82919.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L1_007_000G1_scaffold_31_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54656..55651)
DNA (996bp) protein (332aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D628C1 related cluster n=1 Tax=unknown RepID=UPI0003D628C1
S-adenosyl-methyltransferase MraW
L1_007_000G1_scaffold_31_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55773..56204)
DNA (432bp) protein (144aa)
UPI0003D61C2A related cluster n=1 Tax=unknown RepID=UPI0003D61C2A
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
mraZ; cell division protein MraZ
L1_007_000G1_scaffold_31_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56544..56966)
DNA (423bp) protein (141aa)
UPI0003D639CC related cluster n=1 Tax=unknown RepID=UPI0003D639CC
Uncharacterized protein {ECO:0000313|EMBL:ETI82916.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Displaying items 1-30 of 207 in total

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