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L1_007_000G1_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 226 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_40_1
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(113..658)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KV73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34842.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_000G1_scaffold_40_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(669..2051)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23645.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
AraC family transcriptional regulator
L1_007_000G1_scaffold_40_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2063..2929)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CE64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25310.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_007_000G1_scaffold_40_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2913..3869)
DNA (957bp) protein (319aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ77_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA81815.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase component
L1_007_000G1_scaffold_40_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4028..4705
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70121.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
galactoside O-acetyltransferase
L1_007_000G1_scaffold_40_6
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4814..5740)
DNA (927bp) protein (309aa)
Sugar kinases, ribokinase family (EC:2.7.1.15)
Putative ribokinase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C6M3_9CLOT
Putative ribokinase {ECO:0000313|EMBL:EEG72170.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L1_007_000G1_scaffold_40_7
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5756..7447)
DNA (1692bp) protein (564aa)
beta-galactosidase (EC:3.2.1.23)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1H3_9CLOT
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EEG73987.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L1_007_000G1_scaffold_40_8
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7444..7881)
DNA (438bp) protein (146aa)
Transcriptional regulator MarR family n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N6G4_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDF09024.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L1_007_000G1_scaffold_40_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7888..9741)
DNA (1854bp) protein (618aa)
ATP-binding cassette subfamily B bacterial n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBY4_9FIRM
ATP-binding cassette subfamily B bacterial {ECO:0000313|EMBL:CDE36483.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000G1_scaffold_40_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9741..11468)
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036C7DCA
ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:CDE36484.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000G1_scaffold_40_11
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11617..12228)
DNA (612bp) protein (204aa)
apl; alkaline phosphatase like protein (EC:3.1.3.1)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EV98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB00711.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L1_007_000G1_scaffold_40_12
unknown

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comp(12210..12380)
DNA (171bp) protein (57aa)

This feature has no annotations

L1_007_000G1_scaffold_40_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12518..13657
DNA (1140bp) protein (380aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0Z494_9CLOT
L1_007_000G1_scaffold_40_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13659..14774
DNA (1116bp) protein (372aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=1 Tax=Clostridium sp. D5 RepID=F0Z493_9CLOT
Glucose-1-phosphate adenylyltransferase, GlgD subunit {ECO:0000313|EMBL:EGB91206.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_000G1_scaffold_40_15
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14916..15422)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MSC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS74000.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L1_007_000G1_scaffold_40_16
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15472..16392)
DNA (921bp) protein (307aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
glsA; glutaminase A (EC:3.5.1.2)
Glutaminase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CVR2_9CLOT
L1_007_000G1_scaffold_40_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16513..18636)
DNA (2124bp) protein (708aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FS64_9FIRM
L1_007_000G1_scaffold_40_18
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19857..20345)
DNA (489bp) protein (163aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
MJ0936 family phosphodiesterase n=1 Tax=Dorea sp. 5-2 RepID=R9MPE2_9FIRM
phosphodiesterase protein
L1_007_000G1_scaffold_40_19
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20349..20942)
DNA (594bp) protein (198aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Non-canonical purine NTP pyrophosphatase n=2 Tax=Lachnospiraceae RepID=E9RWS5_9FIRM
ribonuclease Ph
L1_007_000G1_scaffold_40_20
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20935..22089)
DNA (1155bp) protein (385aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JPB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36759.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Predicted N6-adenine-specific DNA methylase
L1_007_000G1_scaffold_40_21
unknown

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comp(22288..22476)
DNA (189bp) protein (63aa)

This feature has no annotations

L1_007_000G1_scaffold_40_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22851..23321)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YTR7_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94287.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted membrane protein
L1_007_000G1_scaffold_40_23
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23325..25445)
DNA (2121bp) protein (707aa)
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82274.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L1_007_000G1_scaffold_40_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25521..26387)
DNA (867bp) protein (289aa)
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=4 Tax=Clostridiales RepID=A7B247_RUMGN
Fructose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:EGN46954.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_007_000G1_scaffold_40_25
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26573..27553)
DNA (981bp) protein (327aa)
Lipid kinase, YegS/Rv2252/BmrU family {ECO:0000313|EMBL:EEG74360.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEG74360.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Lipid kinase, YegS/Rv2252/BmrU family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0M3_9CLOT
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L1_007_000G1_scaffold_40_26
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27671..27928)
DNA (258bp) protein (86aa)
HPr-like protein crh n=2 Tax=Coprococcus RepID=C0BD97_9FIRM
HPr-like protein crh {ECO:0000313|EMBL:EEG88443.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Phosphotransferase System HPr (HPr) Family
L1_007_000G1_scaffold_40_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27925..28890)
DNA (966bp) protein (322aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Clostridium sp. D5 RepID=F0YTA4_9CLOT
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_40_28
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28895..29773)
DNA (879bp) protein (293aa)
UPF0042 nucleotide-binding protein BN814_00233 n=2 Tax=Firmicutes RepID=R5BLJ3_9FIRM
Nucleotide-binding protein HMPREF9457_01402 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Predicted P-loop-containing kinase
L1_007_000G1_scaffold_40_29
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29819..30745)
DNA (927bp) protein (309aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Clostridiales RepID=B0NGD7_CLOSV
L1_007_000G1_scaffold_40_30
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30911..32191
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XKH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06862.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Hemolysins and related proteins containing CBS domains
Displaying items 1-30 of 226 in total

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