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L1_007_000G1_scaffold_50

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Displaying items 1-30 of 217 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_50_1
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..122)
DNA (120bp) protein (40aa)
Selenate reductase, YgfK subunit n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUF0_9FIRM
Selenate reductase, YgfK subunit {ECO:0000313|EMBL:EGN36035.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
selenate reductase YgfK
L1_007_000G1_scaffold_50_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(135..1466)
DNA (1332bp) protein (444aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36036.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
putative selenium metabolism protein SsnA
L1_007_000G1_scaffold_50_3
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1478..2821)
DNA (1344bp) protein (448aa)
Putative permease n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MJG8_9FIRM
Putative permease {ECO:0000313|EMBL:EDR95750.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
uracil-xanthine permease
L1_007_000G1_scaffold_50_4
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3317..3970
DNA (654bp) protein (218aa)
YheO-like protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHC8_CLOSV
YheO-like protein {ECO:0000313|EMBL:EDS06005.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
YheO domain-containing protein
L1_007_000G1_scaffold_50_5
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3996..5240
DNA (1245bp) protein (415aa)
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:EDS06006.1}; EC=4.3.1.15 {ECO:0000313|EMBL:EDS06006.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
diaminopropionate ammonia-lyase (EC:4.3.1.15)
Diaminopropionate ammonia-lyase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHC9_CLOSV
L1_007_000G1_scaffold_50_6
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5253..6566
DNA (1314bp) protein (438aa)
Putative selenium metabolism hydrolase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHD0_CLOSV
Putative selenium metabolism hydrolase {ECO:0000313|EMBL:EDS06007.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
M20/DapE family protein YgeY
L1_007_000G1_scaffold_50_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6626..7819
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36042.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
probable carbamoyltransferase YgeW
L1_007_000G1_scaffold_50_8
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7838..8782
DNA (945bp) protein (315aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHD2_CLOSV
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L1_007_000G1_scaffold_50_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8873..9793)
DNA (921bp) protein (307aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RK14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18736.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Mg2 transporter protein CorA family protein
L1_007_000G1_scaffold_50_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9811..10854)
DNA (1044bp) protein (348aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Clostridiales RepID=B0NHD3_CLOSV
nrdF; ribonucleotide-diphosphate reductase subunit beta
L1_007_000G1_scaffold_50_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10882..13413)
DNA (2532bp) protein (844aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Ribonucleoside-diphosphate reductase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUG0_9FIRM
ribonucleotide-diphosphate reductase subunit alpha
L1_007_000G1_scaffold_50_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13638..14831
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W445_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97760.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L1_007_000G1_scaffold_50_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14896..15384)
DNA (489bp) protein (163aa)
2Fe-2S iron-sulfur cluster-binding domain protein n=2 Tax=Clostridiales RepID=B0NHD6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36046.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
(2Fe-2S)-binding domain-containing protein
L1_007_000G1_scaffold_50_14
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15381..16265)
DNA (885bp) protein (295aa)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs (EC:1.17.1.4)
FAD binding domain in molybdopterin dehydrogenase n=2 Tax=Clostridiales RepID=B0NHD7_CLOSV
FAD binding domain in molybdopterin dehydrogenase {ECO:0000313|EMBL:EDS06014.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L1_007_000G1_scaffold_50_15
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16258..18561)
DNA (2304bp) protein (768aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36048.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
L1_007_000G1_scaffold_50_16
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18566..19846)
DNA (1281bp) protein (427aa)
Putative guanine deaminase n=2 Tax=Clostridiales RepID=B0NHD9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36049.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
amidohydrolase
L1_007_000G1_scaffold_50_17
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20030..21883)
DNA (1854bp) protein (618aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0NHE0_CLOSV
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS06017.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_007_000G1_scaffold_50_18
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21969..22778)
DNA (810bp) protein (270aa)
BaiL n=1 Tax=Clostridium scindens (strain JCM 10418 / VPI 12708) RepID=B4YST5_CLOSV
BaiL {ECO:0000313|EMBL:ACF20980.1}; TaxID=29347 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium scindens (strain JCM 10418 / VPI 12708).;"
short-chain dehydrogenase/reductase SDR
L1_007_000G1_scaffold_50_19
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22780..24093)
DNA (1314bp) protein (438aa)
BaiK n=1 Tax=Clostridium scindens (strain JCM 10418 / VPI 12708) RepID=B4YST4_CLOSV
BaiK {ECO:0000313|EMBL:ACF20979.1}; TaxID=29347 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium scindens (strain JCM 10418 / VPI 12708).;"
acyl-CoA transferase/carnitine dehydratase
L1_007_000G1_scaffold_50_20
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24141..25862)
DNA (1722bp) protein (574aa)
BaiJ n=1 Tax=Clostridium scindens (strain JCM 10418 / VPI 12708) RepID=B4YST3_CLOSV
BaiJ {ECO:0000313|EMBL:ACF20978.1}; TaxID=29347 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium scindens (strain JCM 10418 / VPI 12708).;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
L1_007_000G1_scaffold_50_21
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26042..26950
DNA (909bp) protein (303aa)
LysR substrate binding domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BW27_9CLOT
LysR substrate binding domain protein {ECO:0000313|EMBL:EEG75890.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
LysR family transcriptional regulator
L1_007_000G1_scaffold_50_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27024..27488
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IDE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN36051.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
TspO and MBR-like protein
L1_007_000G1_scaffold_50_23
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27586..28335)
DNA (750bp) protein (250aa)
Bile acid 7-dehydroxylase 1/3; EC=1.17.98.1;; Bile acid-inducible protein 1/3; Cholate 7-alpha-dehydroxylase 1/3; TaxID=29347 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium scindens (strain JCM 10418 / VPI 12708).;"
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100 1.1.1.159)
Bile acid 7-dehydroxylase 1/3 n=1 Tax=Clostridium scindens (strain JCM 10418 / VPI 12708) RepID=BAIA1_CLOSV
L1_007_000G1_scaffold_50_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28536..30629)
DNA (2094bp) protein (698aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36053.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ABC-type transport system, permease
L1_007_000G1_scaffold_50_25
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30616..31371)
DNA (756bp) protein (252aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHE7_CLOSV
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS06024.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L1_007_000G1_scaffold_50_26
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31554..32255
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36055.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
two-component response regulator
L1_007_000G1_scaffold_50_27
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32268..33554
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36056.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
two-component sensor histidine kinase
L1_007_000G1_scaffold_50_28
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33562..34065)
DNA (504bp) protein (168aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3E8_9CLOT
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:EEG73324.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
EBSC protein
L1_007_000G1_scaffold_50_29
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34079..34555)
DNA (477bp) protein (159aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHG1_CLOSV
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
molybdenum cofactor biosynthesis protein C
L1_007_000G1_scaffold_50_30
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34579..35901)
DNA (1323bp) protein (441aa)
Probable D-serine dehydratase {ECO:0000256|HAMAP-Rule:MF_01030}; EC=4.3.1.18 {ECO:0000256|HAMAP-Rule:MF_01030};; D-serine deaminase {ECO:0000256|HAMAP-Rule:MF_01030}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Probable D-serine dehydratase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHG2_CLOSV
D-serine ammonia-lyase
Displaying items 1-30 of 217 in total

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