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L1_007_000G1_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 209 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_56_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(71..571)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H330_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS53300.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_000G1_scaffold_56_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(578..3232)
DNA (2655bp) protein (885aa)
Outer membrane protein n=3 Tax=Bacteroides RepID=E5UP56_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY79749.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_007_000G1_scaffold_56_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3229..4032)
DNA (804bp) protein (268aa)
Sigma factor regulatory protein, FecR/PupR family n=5 Tax=Bacteroides RepID=C6Z029_9BACE
anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:ABR38748.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000G1_scaffold_56_4
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4102..4611)
DNA (510bp) protein (170aa)
RNA polymerase ECF-type sigma factor n=2 Tax=Bacteroides RepID=E5UP58_9BACE
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDF17685.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
RNA polymerase ECF-type sigma factor
L1_007_000G1_scaffold_56_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4857..6560)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZX97_BACVU
Susd and RagB outer membrane lipofamily protein {ECO:0000313|EMBL:KDS53305.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_000G1_scaffold_56_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6560..9601)
DNA (3042bp) protein (1014aa)
TonB-dependent receptor n=6 Tax=root RepID=D4VAI1_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOR98318.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_007_000G1_scaffold_56_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9922..10467
DNA (546bp) protein (182aa)
RNA polymerase sigma-70 factor n=3 Tax=root RepID=C6Z033_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EET14251.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
RNA polymerase ECF-type sigma factor
L1_007_000G1_scaffold_56_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10439..11017)
DNA (579bp) protein (193aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Phosphoribosylglycinamide formyltransferase n=6 Tax=Bacteroides RepID=A6KZ79_BACV8
phosphoribosylglycinamide formyltransferase
L1_007_000G1_scaffold_56_9
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11170..11406
DNA (237bp) protein (79aa)
Acyl carrier protein n=15 Tax=Bacteroides RepID=ACP_BACV8
acpP; acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L1_007_000G1_scaffold_56_10
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11425..12690
DNA (1266bp) protein (422aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=4 Tax=Bacteroides RepID=A6KZ77_BACV8
3-oxoacyl-ACP synthase
L1_007_000G1_scaffold_56_11
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12693..13619
DNA (927bp) protein (309aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Ribonuclease 3 n=2 Tax=Bacteroides RepID=C6Z037_9BACE
ribonuclease III
L1_007_000G1_scaffold_56_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13764..15317)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9J0G2_BACVU
Type I phosphodiesterase / nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:KDS53314.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
secreted sulfatase
L1_007_000G1_scaffold_56_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15336..17411)
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZW38_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY79760.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
alpha-glycosidase
L1_007_000G1_scaffold_56_14
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17418..18803)
DNA (1386bp) protein (462aa)
Glycoside hydrolase family 29 n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NY95_9BACE
Glycoside hydrolase family 29 {ECO:0000313|EMBL:CDF17675.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
glycoside hydrolase
L1_007_000G1_scaffold_56_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18807..20243)
DNA (1437bp) protein (479aa)
Arylsulfatase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAJ0_BACVU
Type I phosphodiesterase / nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:KDS28043.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
sulfatase
L1_007_000G1_scaffold_56_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20345..22258)
DNA (1914bp) protein (638aa)
SusD family protein n=5 Tax=root RepID=C6Z042_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY79764.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L1_007_000G1_scaffold_56_17
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22279..25533)
DNA (3255bp) protein (1085aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=root RepID=C6Z043_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EET14261.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
putative outer membrane protein
L1_007_000G1_scaffold_56_18
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25718..29791
DNA (4074bp) protein (1358aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6Z044_9BACE
Response regulator receiver domain protein {ECO:0000313|EMBL:EET14262.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
histidine kinase
L1_007_000G1_scaffold_56_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29801..30811)
DNA (1011bp) protein (337aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=7 Tax=Bacteroides RepID=A6KZ69_BACV8
6-phosphofructokinase 3 {ECO:0000313|EMBL:EOR98304.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000G1_scaffold_56_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30926..32464
DNA (1539bp) protein (513aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9UCI1_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY79768.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
auxin-regulated protein
L1_007_000G1_scaffold_56_21
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32469..34391
DNA (1923bp) protein (641aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5UP77_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV69013.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L1_007_000G1_scaffold_56_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34388..35197
DNA (810bp) protein (270aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KZ66_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY79770.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000G1_scaffold_56_23
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35286..36158)
DNA (873bp) protein (291aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KZ65_BACV8
Uncharacterized protein {ECO:0000313|EMBL:CDF17665.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L1_007_000G1_scaffold_56_24
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36110..36208)
DNA (99bp) protein (33aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1ULX6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17664.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000G1_scaffold_56_25
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36306..38729
DNA (2424bp) protein (808aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9UCI3_BACVU
two-component system sensor histidine kinase
L1_007_000G1_scaffold_56_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38847..39422)
DNA (576bp) protein (192aa)
Uncharacterized protein n=7 Tax=root RepID=A6KZ63_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98297.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000G1_scaffold_56_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39473..40768)
DNA (1296bp) protein (432aa)
Coenzyme F390 synthetase n=3 Tax=Bacteroides RepID=E5UP82_9BACE
AMP-binding enzyme family protein {ECO:0000313|EMBL:KDS53328.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
phenylacetate--CoA ligase
L1_007_000G1_scaffold_56_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40770..42395)
DNA (1626bp) protein (542aa)
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=2 Tax=Bacteroides vulgatus RepID=D4VAK2_BACVU
6-aminopenicillanic acid acyl-transferase family protein {ECO:0000313|EMBL:KDS53329.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
choloylglycine hydrolase
L1_007_000G1_scaffold_56_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42427..43917)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=R9HAW4_BACVU
FAD binding domain protein {ECO:0000313|EMBL:KDS28030.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_007_000G1_scaffold_56_30
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43910..47764)
DNA (3855bp) protein (1285aa)
Acyltransferase n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6Z055_9BACE
Acyltransferase {ECO:0000313|EMBL:EET14273.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
exporter
Displaying items 1-30 of 209 in total

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