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L1_007_000G1_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_88_1
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

456..1778
DNA (1323bp) protein (441aa)
MATE efflux family protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JIY0_9BACT
MATE efflux family protein {ECO:0000313|EMBL:CDE63879.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
multidrug efflux pump BexA
L1_007_000G1_scaffold_88_2

Not on your lists

comp(2200..2646)
DNA (447bp) protein (149aa)
Uncharacterized protein n=4 Tax=root RepID=B0MSN6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKC44840.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000G1_scaffold_88_3
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2977..3462)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JLU5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63882.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L1_007_000G1_scaffold_88_4
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3472..4188)
DNA (717bp) protein (239aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Demethylmenaquinone methyltransferase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJU9_9BACT
ubiquinone/menaquinone biosynthesis methyltransferase
L1_007_000G1_scaffold_88_5
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4201..5448)
DNA (1248bp) protein (416aa)
Efflux ABC transporter, permease protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSN3_9BACT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDS04797.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
lipoprotein release ABC transporter permease
L1_007_000G1_scaffold_88_6
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5526..6275
DNA (750bp) protein (250aa)
Oxidoreductase short chain dehydrogenase/reductase family protein n=2 Tax=Alistipes RepID=R7JJ35_9BACT
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDE63885.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
short-chain alcohol dehydrogenase
L1_007_000G1_scaffold_88_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6354..7115
DNA (762bp) protein (254aa)
Zn-dependent protease n=3 Tax=root RepID=K1SH15_9ZZZZ
Putative neutral zinc metallopeptidase {ECO:0000313|EMBL:CDE63886.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Predicted Zn-dependent protease
L1_007_000G1_scaffold_88_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7115..8680
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JLU8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63887.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L1_007_000G1_scaffold_88_9
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8690..10192
DNA (1503bp) protein (501aa)
MBOAT family protein n=3 Tax=root RepID=B0MSJ3_9BACT
MBOAT family protein {ECO:0000313|EMBL:CDE63888.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
D-alanine export membrane protein
L1_007_000G1_scaffold_88_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10200..10877
DNA (678bp) protein (226aa)
PAP2 family protein n=2 Tax=Alistipes RepID=B0MSJ2_9BACT
PAP2 family protein {ECO:0000313|EMBL:CDE63889.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
PAP2 superfamily.
L1_007_000G1_scaffold_88_11
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10987..12183)
DNA (1197bp) protein (399aa)
Transporter major facilitator family protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJ38_9BACT
Transporter major facilitator family protein {ECO:0000313|EMBL:CDE63890.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
sugar efflux transporter
L1_007_000G1_scaffold_88_12
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12589..14766)
DNA (2178bp) protein (726aa)
DNA/RNA non-specific endonuclease n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJM9_9BACT
DNA/RNA non-specific endonuclease {ECO:0000313|EMBL:CDE63891.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
DNA/RNA endonuclease G, NUC1
L1_007_000G1_scaffold_88_13
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15302..17026
DNA (1725bp) protein (575aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=2 Tax=Alistipes RepID=B0MSK3_9BACT
L1_007_000G1_scaffold_88_14
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17040..18152
DNA (1113bp) protein (371aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSK2_9BACT
L1_007_000G1_scaffold_88_15
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18498..19859
DNA (1362bp) protein (454aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Tryptophan synthase beta chain n=3 Tax=root RepID=B0MSK0_9BACT
pyridoxal-phosphate dependent TrpB-like protein
L1_007_000G1_scaffold_88_16
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(20708..21322)
DNA (615bp) protein (205aa)
50S ribosomal protein L17 n=3 Tax=root RepID=B0MSJ9_9BACT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
50S ribosomal protein L17
L1_007_000G1_scaffold_88_17
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21328..22320)
DNA (993bp) protein (331aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=3 Tax=root RepID=B0MSJ8_9BACT
L1_007_000G1_scaffold_88_18
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(22345..22953)
DNA (609bp) protein (203aa)
30S ribosomal protein S4 n=2 Tax=Alistipes RepID=B0MSJ7_9BACT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
30S ribosomal protein S4
L1_007_000G1_scaffold_88_19
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(23011..23400)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=2 Tax=Alistipes RepID=B0MSJ6_9BACT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
30S ribosomal protein S11
L1_007_000G1_scaffold_88_20
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(23414..23794)
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=2 Tax=Alistipes RepID=B0MSI9_9BACT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
30S ribosomal protein S13
L1_007_000G1_scaffold_88_21
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23829..23945)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=7 Tax=Alistipes RepID=D4IML2_9BACT
LSU ribosomal protein L36P
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L1_007_000G1_scaffold_88_22
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23967..24185)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=2 Tax=Alistipes RepID=B0MSI8_9BACT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
bacterial translation initiation factor 1 (bIF-1)
L1_007_000G1_scaffold_88_23
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24192..24968)
DNA (777bp) protein (259aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Methionine aminopeptidase n=3 Tax=root RepID=B0MSI7_9BACT
methionine aminopeptidase
L1_007_000G1_scaffold_88_24
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(24995..26383)
DNA (1389bp) protein (463aa)
Protein translocase subunit SecY n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJW6_9BACT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
protein translocase subunit SecY
L1_007_000G1_scaffold_88_25
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(26405..26851)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=3 Tax=root RepID=B0MSI5_9BACT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
LSU ribosomal protein L15P
L1_007_000G1_scaffold_88_26
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(26879..27061)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=3 Tax=root RepID=B0MSH9_9BACT
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
50S ribosomal protein L30
L1_007_000G1_scaffold_88_27
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(27076..27579)
DNA (504bp) protein (168aa)
30S ribosomal protein S5 n=4 Tax=root RepID=B0MSH8_9BACT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
30S ribosomal protein S5
L1_007_000G1_scaffold_88_28
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(27601..27924)
DNA (324bp) protein (108aa)
50S ribosomal protein L18 n=3 Tax=root RepID=B0MSH7_9BACT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
50S ribosomal protein L18
L1_007_000G1_scaffold_88_29
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(27981..28568)
DNA (588bp) protein (196aa)
50S ribosomal protein L6 n=4 Tax=root RepID=B0MSH6_9BACT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
50S ribosomal protein L6
L1_007_000G1_scaffold_88_30
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(28590..28988)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=3 Tax=root RepID=B0MSH5_9BACT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
30S ribosomal protein S8
Displaying items 1-30 of 185 in total

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