ggKbase home page

L1_007_000G1_scaffold_204

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_204_1
unknown

Not on your lists

3..125
DNA (123bp) protein (41aa)

This feature has no annotations

L1_007_000G1_scaffold_204_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

557..1381
DNA (825bp) protein (275aa)
Arylamine N-acetyltransferase (EC:2.3.1.118)
N-hydroxyarylamine O-acetyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0YVK7_9CLOT
N-hydroxyarylamine O-acetyltransferase {ECO:0000313|EMBL:EGB93770.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_000G1_scaffold_204_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2401..2793
DNA (393bp) protein (131aa)
Vacuolar sorting-associated protein 11 n=1 Tax=Clostridium sp. D5 RepID=F0YVT4_9CLOT
Vacuolar sorting-associated protein 11 {ECO:0000313|EMBL:EGB93772.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_000G1_scaffold_204_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2800..3303
DNA (504bp) protein (168aa)
Trigger factor (TF) n=1 Tax=Clostridium sp. D5 RepID=F0YVT5_9CLOT
Trigger factor (TF) {ECO:0000313|EMBL:EGB93773.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
trigger factor
L1_007_000G1_scaffold_204_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3328..5751
DNA (2424bp) protein (808aa)
Clp protease, ATP-binding subunit ClpC n=1 Tax=Clostridium sp. D5 RepID=F0YVT6_9CLOT
Clp protease, ATP-binding subunit ClpC {ECO:0000313|EMBL:EGB93774.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ATPases with chaperone activity, ATP-binding subunit
L1_007_000G1_scaffold_204_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6135..8831
DNA (2697bp) protein (899aa)
Putative formate acetyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0YVT7_9CLOT
Putative formate acetyltransferase {ECO:0000313|EMBL:EGB93775.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
4-hydroxyphenylacetate decarboxylase large subunit
L1_007_000G1_scaffold_204_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8858..9115
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YVT8_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93776.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
4-hydroxyphenylacetate decarboxylase small subunit
L1_007_000G1_scaffold_204_8
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9142..10080
DNA (939bp) protein (313aa)
Putative radical SAM domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YVT9_9CLOT
Putative radical SAM domain protein {ECO:0000313|EMBL:EGB93777.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
4-hydroxyphenylacetate decarboxylase activating enzyme
L1_007_000G1_scaffold_204_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10119..10847
DNA (729bp) protein (243aa)
Putative integral membrane protein n=1 Tax=Clostridium sp. D5 RepID=F0YVU0_9CLOT
Putative integral membrane protein {ECO:0000313|EMBL:EGB93778.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_204_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10894..11316
DNA (423bp) protein (141aa)
Hemerythrin family protein n=1 Tax=Clostridium sp. D5 RepID=F0YVU1_9CLOT
Hemerythrin family protein {ECO:0000313|EMBL:EGB93779.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hemerythrin-like metal-binding domain
L1_007_000G1_scaffold_204_11
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11404..12216
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JDZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32226.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
Tetratricopeptide repeats containing protein
L1_007_000G1_scaffold_204_12
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12203..13213
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JM52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32227.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
L1_007_000G1_scaffold_204_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13228..13845
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YVU2_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93780.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_204_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13968..14618
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YVU3_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93781.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
cyclic nucleotide-binding protein
L1_007_000G1_scaffold_204_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14651..15310
DNA (660bp) protein (220aa)
Putative cyclic nucleotide-binding domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YVU4_9CLOT
Putative cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EGB93782.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
cyclic nucleotide-binding protein
L1_007_000G1_scaffold_204_16
Streptococcus sp. CM6, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15418..15897)
DNA (480bp) protein (160aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9 2.5.1.-)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=936580 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. CM6.;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Streptococcus oralis SK313 RepID=F9Q3K9_STROR
L1_007_000G1_scaffold_204_17
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15899..17107)
DNA (1209bp) protein (403aa)
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12)
Riboflavin biosynthesis protein RibBA n=12 Tax=Firmicutes RepID=D4JCL9_9FIRM
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L1_007_000G1_scaffold_204_18
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17121..17756)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YWS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25981.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
riboflavin synthase
L1_007_000G1_scaffold_204_19
Streptococcus sp. M334, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17738..18841)
DNA (1104bp) protein (368aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Streptococcus sp. M334 RepID=E9FMN9_9STRE
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=563038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. M334.;"
riboflavin biosynthesis protein RibD
L1_007_000G1_scaffold_204_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19484..21679
DNA (2196bp) protein (732aa)
Putative cell wall hydrolase n=1 Tax=Clostridium sp. D5 RepID=F0YVX1_9CLOT
Putative cell wall hydrolase {ECO:0000313|EMBL:EGB93809.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_007_000G1_scaffold_204_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22092..23081
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z2U3_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91768.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Putative transposase, YhgA-like.
L1_007_000G1_scaffold_204_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23353..25887
DNA (2535bp) protein (845aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Ribonucleoside-diphosphate reductase n=1 Tax=Clostridium sp. D5 RepID=F0YVX6_9CLOT
ribonucleotide-diphosphate reductase subunit alpha
L1_007_000G1_scaffold_204_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25915..26958
DNA (1044bp) protein (348aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Clostridium sp. D5 RepID=F0YVX7_9CLOT
nrdF; ribonucleotide-diphosphate reductase subunit beta
L1_007_000G1_scaffold_204_24
unknown

Not on your lists

26972..27226
DNA (255bp) protein (85aa)

This feature has no annotations

L1_007_000G1_scaffold_204_25
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27138..27686)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YVX8_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93816.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_204_26
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27796..28425)
DNA (630bp) protein (210aa)
Putative cytidylate kinase (Ck) (Cytidine monophosphate kinase) n=1 Tax=Clostridium sp. D5 RepID=F0YVY0_9CLOT
Putative cytidylate kinase (Ck) (Cytidine monophosphate kinase) {ECO:0000313|EMBL:EGB93818.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_204_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28720..29820
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YVY1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93819.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_204_28
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(30224..31876)
DNA (1653bp) protein (551aa)
TnpX site-specific recombinase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1A4_9FIRM
TnpX site-specific recombinase {ECO:0000313|EMBL:CDB03174.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_000G1_scaffold_204_29
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(31881..32138)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ETD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03175.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_000G1_scaffold_204_30
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32615..32878
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJM5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05102.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
Displaying items 1-30 of 118 in total

View Taxonomy