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L1_007_000G1_scaffold_217

Search features with annotation key words

Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_217_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1188)
DNA (1188bp) protein (396aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Carbamoyl-phosphate synthase large chain n=9 Tax=Clostridium RepID=G5I0C0_9CLOT
carbamoyl-phosphate synthase large subunit
L1_007_000G1_scaffold_217_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1188..2261)
DNA (1074bp) protein (358aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Carbamoyl-phosphate synthase small chain n=9 Tax=Clostridium RepID=G5I0B9_9CLOT
carbamoyl-phosphate synthase small subunit
L1_007_000G1_scaffold_217_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2657..3907)
DNA (1251bp) protein (417aa)
Spore peptidoglycan hydrolase n=9 Tax=Clostridium RepID=N9XAG7_9CLOT
Spore peptidoglycan hydrolase {ECO:0000313|EMBL:ENZ66339.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
peptidoglycan-binding domain-containing protein
L1_007_000G1_scaffold_217_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4010..4645)
DNA (636bp) protein (212aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9W0D4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12330.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Cytidylate kinase
L1_007_000G1_scaffold_217_5
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5178..6281
DNA (1104bp) protein (368aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=7 Tax=Clostridium RepID=N9VZW9_9CLOT
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L1_007_000G1_scaffold_217_6
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6263..6943
DNA (681bp) protein (227aa)
Riboflavin synthase, alpha subunit n=7 Tax=Clostridium RepID=N9WSY2_9CLOT
Riboflavin synthase {ECO:0000313|EMBL:CDF23295.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
riboflavin synthase alpha subunit
L1_007_000G1_scaffold_217_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6990..8189
DNA (1200bp) protein (400aa)
Riboflavin biosynthesis protein RibBA n=6 Tax=Clostridium clostridioforme RepID=N9WSF0_9CLOT
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
GTP cyclohydrolase II
L1_007_000G1_scaffold_217_8
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8247..8768
DNA (522bp) protein (174aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
6,7-dimethyl-8-ribityllumazine synthase n=7 Tax=Clostridium RepID=N9XJY3_9CLOT
6,7-dimethyl-8-ribityllumazine synthase
L1_007_000G1_scaffold_217_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9002..9574)
DNA (573bp) protein (191aa)
glpK3; glycerol kinase 1 (EC:2.7.1.30)
Uncharacterized protein n=2 Tax=Clostridium clostridioforme RepID=N9YHX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ66333.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L1_007_000G1_scaffold_217_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9678..10292)
DNA (615bp) protein (205aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9XKX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ66332.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Periplasmic binding protein domain containing protein
L1_007_000G1_scaffold_217_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10335..10601)
DNA (267bp) protein (89aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WSY7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ66331.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
LacI family transcriptional regulator
L1_007_000G1_scaffold_217_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10707..11243)
DNA (537bp) protein (179aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=9 Tax=Clostridium RepID=G5I0A6_9CLOT
L1_007_000G1_scaffold_217_13
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11245..13404)
DNA (2160bp) protein (720aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Clostridium RepID=G5I0A5_9CLOT
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CDF23355.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L1_007_000G1_scaffold_217_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13677..14804)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=A8RQU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16912.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
transcriptional regulator, LacI family
L1_007_000G1_scaffold_217_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15068..17308
DNA (2241bp) protein (747aa)
PTS system, IIBC component n=6 Tax=Clostridium clostridioforme RepID=N9XKX7_9CLOT
PTS system, IIBC component {ECO:0000313|EMBL:ENZ66327.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
PTS system maltose-specific IIA component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIB component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIC component, Glc family (TC 4.A.1.1.11)
L1_007_000G1_scaffold_217_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17375..18247
DNA (873bp) protein (291aa)
Exodeoxyribonuclease III n=8 Tax=Clostridium RepID=N9WSZ0_9CLOT
Exodeoxyribonuclease III {ECO:0000313|EMBL:ENZ66326.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Metal-dependent hydrolase
L1_007_000G1_scaffold_217_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18286..19785
DNA (1500bp) protein (500aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=8 Tax=Clostridium clostridioforme RepID=G5I0A1_9CLOT
L1_007_000G1_scaffold_217_18
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19888..20670)
DNA (783bp) protein (261aa)
N-acetylmuramoyl-L-alanine amidase n=9 Tax=Clostridium RepID=N9W0E7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23360.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
cell wall hydrolase/autolysin
L1_007_000G1_scaffold_217_19
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20892..22112)
DNA (1221bp) protein (407aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
LL-diaminopimelate aminotransferase n=8 Tax=Clostridium RepID=N9VZY0_9CLOT
LL-diaminopimelate aminotransferase
L1_007_000G1_scaffold_217_20
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22327..23157)
DNA (831bp) protein (277aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=8 Tax=Clostridium RepID=N9XKY0_9CLOT
L1_007_000G1_scaffold_217_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23212..23760)
DNA (549bp) protein (183aa)
Two-component system response regulator n=9 Tax=Clostridium RepID=N9WSZ6_9CLOT
Two-component system response regulator {ECO:0000313|EMBL:ENZ12312.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ANTAR domain-containing protein
L1_007_000G1_scaffold_217_22
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23806..25143)
DNA (1338bp) protein (446aa)
Glutamine synthetase, type I n=7 Tax=Clostridium RepID=N9WSG8_9CLOT
Glutamine synthetase {ECO:0000313|EMBL:CDF23364.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
glutamine synthetase, type I
L1_007_000G1_scaffold_217_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25353..26354)
DNA (1002bp) protein (334aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Diaminopimelate epimerase n=9 Tax=Clostridium RepID=G5I095_9CLOT
diaminopimelate epimerase
L1_007_000G1_scaffold_217_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26436..27305
DNA (870bp) protein (290aa)
AraC family transcriptional regulator n=6 Tax=Clostridium clostridioforme RepID=N9VZY4_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:ENZ66318.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
AraC family transcriptional regulator
L1_007_000G1_scaffold_217_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27452..28615
DNA (1164bp) protein (388aa)
Branched-chain amino acid ABC transporter substrate-binding protein n=8 Tax=Clostridium clostridioforme RepID=N9XKY4_9CLOT
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ66317.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
extracellular ligand-binding receptor
L1_007_000G1_scaffold_217_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28770..29651
DNA (882bp) protein (294aa)
Branched-chain amino acid ABC transporter permease n=8 Tax=Clostridium RepID=N9WT02_9CLOT
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ENZ66316.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
inner-membrane translocator
L1_007_000G1_scaffold_217_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29662..30777
DNA (1116bp) protein (372aa)
Branched-chain amino acid ABC transporter permease n=6 Tax=Clostridium clostridioforme RepID=N9WSH5_9CLOT
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ENZ66315.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
inner-membrane translocator
L1_007_000G1_scaffold_217_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30777..31643
DNA (867bp) protein (289aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=9 Tax=Clostridium RepID=N9W0F3_9CLOT
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ66314.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ABC transporter
L1_007_000G1_scaffold_217_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31630..32337
DNA (708bp) protein (236aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=8 Tax=Clostridium clostridioforme RepID=N9VZY8_9CLOT
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ66313.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ABC transporter
L1_007_000G1_scaffold_217_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32340..32981)
DNA (642bp) protein (214aa)
Orotate phosphoribosyltransferase n=7 Tax=Clostridium clostridioforme RepID=N9XKY9_9CLOT
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:ENZ66312.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
Displaying items 1-30 of 114 in total

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