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L1_007_000G1_scaffold_228

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_228_1
unknown

Not on your lists

comp(1..90)
DNA (90bp) protein (30aa)

This feature has no annotations

L1_007_000G1_scaffold_228_2
unknown

Not on your lists

635..847
DNA (213bp) protein (71aa)

This feature has no annotations

L1_007_000G1_scaffold_228_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

954..2096
DNA (1143bp) protein (381aa)
Putative 4Fe-4S binding domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YY45_9CLOT
Putative 4Fe-4S binding domain protein {ECO:0000313|EMBL:EGB93147.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
aldo/keto reductase
L1_007_000G1_scaffold_228_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2086..2907
DNA (822bp) protein (274aa)
Response regulator receiver domain protein n=2 Tax=Clostridium symbiosum RepID=E9SL62_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92146.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000G1_scaffold_228_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2904..4088
DNA (1185bp) protein (395aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2CYQ1_CLOSY
Signal transduction histidine kinase
L1_007_000G1_scaffold_228_6
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4177..4857
DNA (681bp) protein (227aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7APQ1_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58525.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
L1_007_000G1_scaffold_228_7
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4863..7064
DNA (2202bp) protein (734aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HM03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97511.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
ABC-type transport system, involved in lipoprotein release, permease component
L1_007_000G1_scaffold_228_8
unknown

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7117..7548
DNA (432bp) protein (144aa)

This feature has no annotations

L1_007_000G1_scaffold_228_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7968..9044
DNA (1077bp) protein (359aa)
Putative oxidoreductase n=1 Tax=Clostridium sp. D5 RepID=F0YY47_9CLOT
Putative oxidoreductase {ECO:0000313|EMBL:EGB93149.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L1_007_000G1_scaffold_228_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9105..9791
DNA (687bp) protein (229aa)
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium sp. D5 RepID=F0YY48_9CLOT
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:EGB93150.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Pentose-5-phosphate-3-epimerase
L1_007_000G1_scaffold_228_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9908..11284
DNA (1377bp) protein (459aa)
Inner membrane metabolite transport protein YdjE n=1 Tax=Clostridium sp. D5 RepID=F0YY49_9CLOT
Inner membrane metabolite transport protein YdjE {ECO:0000313|EMBL:EGB93151.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Sugar phosphate permease
L1_007_000G1_scaffold_228_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11350..12405
DNA (1056bp) protein (352aa)
L-iditol 2-dehydrogenase n=1 Tax=Clostridium sp. D5 RepID=F0YY50_9CLOT
L-iditol 2-dehydrogenase {ECO:0000313|EMBL:EGB93152.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L1_007_000G1_scaffold_228_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12429..13265
DNA (837bp) protein (279aa)
Putative membrane protein YdjI n=1 Tax=Clostridium sp. D5 RepID=F0YY51_9CLOT
Putative membrane protein YdjI {ECO:0000313|EMBL:EGB93153.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ydjI; Putative aldolase YdjI
L1_007_000G1_scaffold_228_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13269..14237
DNA (969bp) protein (323aa)
Putative kinase n=1 Tax=Clostridium sp. D5 RepID=F0YY52_9CLOT
Putative kinase {ECO:0000313|EMBL:EGB93154.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative sugar kinase
L1_007_000G1_scaffold_228_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14422..15402
DNA (981bp) protein (327aa)
General stress protein 69 n=1 Tax=Clostridium sp. D5 RepID=F0YY53_9CLOT
General stress protein 69 {ECO:0000313|EMBL:EGB93155.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
aldo/keto reductase
L1_007_000G1_scaffold_228_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15467..16324
DNA (858bp) protein (286aa)
Transcriptional regulator of sugar metabolism n=1 Tax=Clostridium sp. D5 RepID=F0YY54_9CLOT
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:EGB93156.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Transcriptional regulators of sugar metabolism
L1_007_000G1_scaffold_228_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16792..18132
DNA (1341bp) protein (447aa)
Sodium:dicarboxylate symporter family protein n=1 Tax=Clostridium sp. D5 RepID=F0YY56_9CLOT
Sodium:dicarboxylate symporter family protein {ECO:0000313|EMBL:EGB93158.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Na+/H+-dicarboxylate symporters
L1_007_000G1_scaffold_228_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18437..19822
DNA (1386bp) protein (462aa)
MATE efflux family protein n=1 Tax=Clostridium sp. D5 RepID=F0YY58_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EGB93160.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
MATE efflux family protein
L1_007_000G1_scaffold_228_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19844..21088
DNA (1245bp) protein (415aa)
Transporter, major facilitator family n=1 Tax=Clostridium sp. D5 RepID=F0YY59_9CLOT
Transporter, major facilitator family {ECO:0000313|EMBL:EGB93161.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
major facilitator superfamily protein
L1_007_000G1_scaffold_228_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21448..21903
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium sp. D5 RepID=F0YY66_9CLOT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EGB93168.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transcriptional regulator
L1_007_000G1_scaffold_228_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21938..24262
DNA (2325bp) protein (775aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YY67_9CLOT
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EGB93169.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000G1_scaffold_228_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24255..26099
DNA (1845bp) protein (615aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YY68_9CLOT
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EGB93170.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000G1_scaffold_228_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27020..27574
DNA (555bp) protein (185aa)
RNA polymerase, ECF-type sigma factor n=1 Tax=Clostridium sp. D5 RepID=F0YY78_9CLOT
RNA polymerase, ECF-type sigma factor {ECO:0000313|EMBL:EGB93180.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
RNA polymerase sigma-70 factor
L1_007_000G1_scaffold_228_24
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27577..28590
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YY79_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93181.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_228_25
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29138..29557
DNA (420bp) protein (140aa)
General stress-related protein 26 (GS26) n=1 Tax=Clostridium sp. D5 RepID=F0YY81_9CLOT
General stress-related protein 26 (GS26) {ECO:0000313|EMBL:EGB93183.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
L1_007_000G1_scaffold_228_26
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29663..30244
DNA (582bp) protein (194aa)
Chloramphenicol acetyltransferase {ECO:0000313|EMBL:KJJ71394.1}; EC=2.3.1.28 {ECO:0000313|EMBL:KJJ71394.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Chloramphenicol acetyltransferase (EC:2.3.1.28)
Chloramphenicol O-acetyltransferase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HBR6_9CLOT
L1_007_000G1_scaffold_228_27
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30291..30782
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N200_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77305.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
N-acetyltransferase GCN5
L1_007_000G1_scaffold_228_28
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30807..31487
DNA (681bp) protein (227aa)
DNA-binding response regulator PhoP n=1 Tax=Clostridium sp. D5 RepID=F0YY82_9CLOT
DNA-binding response regulator PhoP {ECO:0000313|EMBL:EGB93184.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
DNA-binding response regulator
L1_007_000G1_scaffold_228_29
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31650..33023
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ykoH2; sensor histidine kinase YkoH (EC:2.7.13.3)
Sensor histidine kinase n=1 Tax=Clostridium sp. D5 RepID=F0YY83_9CLOT
L1_007_000G1_scaffold_228_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33086..33850
DNA (765bp) protein (255aa)
Peptidase propeptide and YPEB domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YY86_9CLOT
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:EGB93188.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
Displaying items 1-30 of 104 in total

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