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L1_007_000G1_scaffold_236

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_236_1
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(204..602)
DNA (399bp) protein (133aa)
Uncharacterized protein n=9 Tax=root RepID=A6KXU6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS14963.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
L1_007_000G1_scaffold_236_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(632..1282)
DNA (651bp) protein (217aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KXU5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98069.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000G1_scaffold_236_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1341..2498)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6KXU4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98070.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000G1_scaffold_236_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2527..3501)
DNA (975bp) protein (325aa)
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
D-alanine--D-alanine ligase n=8 Tax=root RepID=DDL_BACV8
L1_007_000G1_scaffold_236_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3498..4571)
DNA (1074bp) protein (358aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Pseudouridine synthase n=7 Tax=Bacteroides RepID=A6KXU2_BACV8
ribosomal large subunit pseudouridine synthase D
L1_007_000G1_scaffold_236_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4590..5231)
DNA (642bp) protein (214aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6KXU1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98073.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000G1_scaffold_236_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5381..6727
DNA (1347bp) protein (449aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6Z3Q6_9BACE
integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KDS24439.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000G1_scaffold_236_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6827..7072)
DNA (246bp) protein (82aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6Z3Q5_9BACE
RNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EIY77943.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_000G1_scaffold_236_9
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7338..11270)
DNA (3933bp) protein (1311aa)
Response regulator receiver domain protein n=4 Tax=root RepID=C6Z3Q4_9BACE
Sensor protein {ECO:0000313|EMBL:EFV68672.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
two-component system sensor histidine kinase/response regulator, hybrid
L1_007_000G1_scaffold_236_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11406..12791)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7P3A0_9BACE
GDSL-like Lipase/Acylhydrolase family protein {ECO:0000313|EMBL:KDS52034.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
xylanase
L1_007_000G1_scaffold_236_11
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12805..12939
DNA (135bp) protein (45aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=G1UM37_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18808.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_000G1_scaffold_236_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13073..16294
DNA (3222bp) protein (1074aa)
TonB-dependent receptor plug domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V5A6_BACVU
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EFG18964.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L1_007_000G1_scaffold_236_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16323..18158
DNA (1836bp) protein (612aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V5A5_BACVU
Putative lipoprotein {ECO:0000313|EMBL:EFG18963.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L1_007_000G1_scaffold_236_14
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18332..19948
DNA (1617bp) protein (539aa)
Arylsulfatase n=5 Tax=Bacteroides RepID=C6Z3Q0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18811.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
sulfatase
L1_007_000G1_scaffold_236_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19966..22281
DNA (2316bp) protein (772aa)
Glycosyl hydrolase family 20, catalytic domain protein n=2 Tax=Bacteroides RepID=C6Z3P9_9BACE
F5/8 type C domain protein {ECO:0000313|EMBL:KDS24432.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
beta-N-acetylhexosaminidase
L1_007_000G1_scaffold_236_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22290..25349
DNA (3060bp) protein (1020aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Beta galactosidase small chain n=4 Tax=Bacteroides RepID=C6Z3P8_9BACE
beta-glycosidase
L1_007_000G1_scaffold_236_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25367..27226
DNA (1860bp) protein (620aa)
Glycoside hydrolase family 29, candidate alpha-L-fucosidase n=2 Tax=Bacteroides vulgatus RepID=A6KXT1_BACV8
alpha-L-fucosidase
F5/8 type C domain protein {ECO:0000313|EMBL:KDS24467.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000G1_scaffold_236_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27473..29869
DNA (2397bp) protein (799aa)
Uncharacterized protein n=4 Tax=root RepID=C6Z3P6_9BACE
Two component regulator propeller family protein {ECO:0000313|EMBL:KDS24471.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_007_000G1_scaffold_236_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30198..30974
DNA (777bp) protein (259aa)
Acid phosphatase {ECO:0000256|PIRNR:PIRNR000897}; EC=3.1.3.2 {ECO:0000256|PIRNR:PIRNR000897};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Acid phosphatase n=6 Tax=Bacteroides RepID=A6KXS9_BACV8
acid phosphatase
L1_007_000G1_scaffold_236_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31007..31198)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H210_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOR98087.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_000G1_scaffold_236_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31213..32367
DNA (1155bp) protein (385aa)
Putative polyphosphate-selective porin O n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KXS8_BACV8
polyphosphate-selective porin O
Putative polyphosphate-selective porin O {ECO:0000313|EMBL:ABR38242.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_000G1_scaffold_236_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32561..33796
DNA (1236bp) protein (412aa)
Anaerobic sulfatase maturase {ECO:0000313|EMBL:KDS52022.1}; EC=1.1.99.- {ECO:0000313|EMBL:KDS52022.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Transcriptional regulator n=2 Tax=Bacteroides vulgatus RepID=A6KXS7_BACV8
anaerobic sulfatase-maturase
L1_007_000G1_scaffold_236_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(33975..34130)
DNA (156bp) protein (52aa)
50S ribosomal protein L34 n=18 Tax=root RepID=RL34_BACV8
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000G1_scaffold_236_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34333..34899
DNA (567bp) protein (189aa)
Elongation factor P n=8 Tax=Bacteroides RepID=EFP_BACV8
elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_000G1_scaffold_236_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35001..35990
DNA (990bp) protein (330aa)
Glycosyltransferase family 2 n=5 Tax=Bacteroides RepID=A6KXS4_BACV8
glycosyl transferase family protein
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:KDS52018.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_000G1_scaffold_236_26
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36064..36753
DNA (690bp) protein (230aa)
DNA repair protein RadC n=3 Tax=Bacteroides RepID=D4V5S0_BACVU
DNA repair protein RadC {ECO:0000313|EMBL:CDF18822.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
DNA repair protein
L1_007_000G1_scaffold_236_27
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36874..40905)
DNA (4032bp) protein (1344aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C5Z2_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDV07549.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
two-component system sensor histidine kinase/response regulator
L1_007_000G1_scaffold_236_28
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41247..44213
DNA (2967bp) protein (989aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C5Z1_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDV07548.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
TonB-dependent receptor plug
L1_007_000G1_scaffold_236_29
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44225..45895
DNA (1671bp) protein (557aa)
SusD family protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C5Z0_9BACE
SusD family protein {ECO:0000313|EMBL:EDV07547.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
RagB/SusD domain-containing protein
L1_007_000G1_scaffold_236_30
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46005..48908
DNA (2904bp) protein (968aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C5Y9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV07546.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
hypothetical protein
Displaying items 1-30 of 85 in total

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