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L1_007_000G1_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_239_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

194..751
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42404.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
DJ-1 family protein
L1_007_000G1_scaffold_239_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

872..2158
DNA (1287bp) protein (429aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Trigger factor n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJV8_9CLOT
trigger factor
L1_007_000G1_scaffold_239_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2283..2864
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ50_9CLOT
L1_007_000G1_scaffold_239_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2903..4219
DNA (1317bp) protein (439aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridium sp. CAG:7 RepID=R5J081_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP-dependent Clp protease ATP-binding subunit ClpX
L1_007_000G1_scaffold_239_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4344..6659
DNA (2316bp) protein (772aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJV3_9CLOT
L1_007_000G1_scaffold_239_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6656..7258
DNA (603bp) protein (201aa)
Probable GTP-binding protein EngB n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ44_9CLOT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ribosome biogenesis GTP-binding protein YsxC
L1_007_000G1_scaffold_239_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7356..7874)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJP4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42378.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_000G1_scaffold_239_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8085..11663
DNA (3579bp) protein (1193aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EU69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61563.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_007_000G1_scaffold_239_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11680..12912
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42370.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_000G1_scaffold_239_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12909..13721
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42369.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_000G1_scaffold_239_11
unknown

Not on your lists

14043..14204
DNA (162bp) protein (54aa)

This feature has no annotations

L1_007_000G1_scaffold_239_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14179..16821
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J069_9CLOT
L1_007_000G1_scaffold_239_13
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16947..17237
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XAA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05331.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L1_007_000G1_scaffold_239_14
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17234..17830
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98711.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_007_000G1_scaffold_239_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17939..19240
DNA (1302bp) protein (434aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42363.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_000G1_scaffold_239_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19237..19383
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J028_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42361.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_000G1_scaffold_239_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19383..20687
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJT5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42360.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_000G1_scaffold_239_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20802..21152
DNA (351bp) protein (117aa)
Anti-sigma factor antagonist n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJM3_9CLOT
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
anti-anti-sigma factor
L1_007_000G1_scaffold_239_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21197..21631
DNA (435bp) protein (145aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=8 Tax=Clostridium RepID=N9X6V6_9CLOT
Anti-sigma F factor {ECO:0000313|EMBL:ENZ67947.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L1_007_000G1_scaffold_239_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21637..22389
DNA (753bp) protein (251aa)
RNA polymerase sigma factor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EU84_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L1_007_000G1_scaffold_239_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22410..22865)
DNA (456bp) protein (152aa)
Putative stage V sporulation protein AC n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EU88_9FIRM
Putative stage V sporulation protein AC {ECO:0000313|EMBL:EEQ61582.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
SpoVA protein.
L1_007_000G1_scaffold_239_22
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22890..23324)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98073.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_007_000G1_scaffold_239_23
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23314..23940)
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKF8_9CLOT
Stage V sporulation protein AA {ECO:0000313|EMBL:KJJ68806.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Stage V sporulation protein AA.
L1_007_000G1_scaffold_239_24
unknown

Not on your lists

comp(23943..24122)
DNA (180bp) protein (60aa)

This feature has no annotations

L1_007_000G1_scaffold_239_25
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24335..24967)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NT97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00660.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_007_000G1_scaffold_239_26
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25164..25709
DNA (546bp) protein (182aa)
Carbonate dehydratase {ECO:0000313|EMBL:EEG90279.1}; EC=4.2.1.1 {ECO:0000313|EMBL:EEG90279.1};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Carbonate dehydratase (EC:4.2.1.1)
Carbonate dehydratase n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B8P2_9FIRM
L1_007_000G1_scaffold_239_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25955..27256
DNA (1302bp) protein (434aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3B2_9CLOT
L1_007_000G1_scaffold_239_28
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27349..29592)
DNA (2244bp) protein (748aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KNH8_CLOPH
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:EXG85668.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
AraC family transcriptional regulator
L1_007_000G1_scaffold_239_29
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29885..31447
DNA (1563bp) protein (521aa)
ABC-type sugar transport system, periplasmic component n=3 Tax=Roseburia RepID=D4KX96_9FIRM
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EXG85669.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
ABC-type sugar transport system, periplasmic component
L1_007_000G1_scaffold_239_30
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31482..32435
DNA (954bp) protein (318aa)
ABC-type polysaccharide transport system permease component n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EVJ4_9FIRM
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:EXG85670.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
ABC-type polysaccharide transport system, permease component
Displaying items 1-30 of 97 in total

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