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L1_007_000G1_scaffold_248

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Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_248_1
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(355..1200)
DNA (846bp) protein (282aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LYZ7_9CLOT
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:AGF58525.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L1_007_000G1_scaffold_248_2
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

1580..3298
DNA (1719bp) protein (573aa)
ABC transporter transmembrane protein id=4129499 bin=GWF2_Clostridiales_38_85 species=unknown genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
ABC transporter
Tax=GWF2_Clostridiales_38_85_curated
L1_007_000G1_scaffold_248_3
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3288..5036
DNA (1749bp) protein (583aa)
ABC transporter transmembrane region n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KTA2_CLOPH
ABC transporter
ABC transporter transmembrane region {ECO:0000313|EMBL:ABX43732.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_007_000G1_scaffold_248_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5153..5662
DNA (510bp) protein (170aa)
Tryptophan-rich sensory protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U5S6_9CLOT
Tryptophan-rich sensory protein {ECO:0000313|EMBL:EKQ50219.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
TspO and MBR like protein
L1_007_000G1_scaffold_248_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5835..8000
DNA (2166bp) protein (722aa)
DNA topoisomerase 3 {ECO:0000313|EMBL:AGX42199.1}; EC=5.99.1.2 {ECO:0000313|EMBL:AGX42199.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
topB1; DNA topoisomerase 3 (EC:5.99.1.2)
DNA topoisomerase 3 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN11_CLOSA
L1_007_000G1_scaffold_248_6
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8242..9255
DNA (1014bp) protein (338aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T2E8_9CLOT
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EKQ53428.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
L1_007_000G1_scaffold_248_7
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9292..10059
DNA (768bp) protein (256aa)
spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002D55D93
ABC transporter related protein
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETD68486.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L1_007_000G1_scaffold_248_8
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10043..10870
DNA (828bp) protein (276aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TZP1_9CLOT
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EKQ53426.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
binding-protein-dependent transport system inner membrane protein
L1_007_000G1_scaffold_248_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11309..11698
DNA (390bp) protein (130aa)
LrgA family protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRA3_CLOSA
LrgA family protein
LrgA family protein {ECO:0000313|EMBL:AGX42206.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_000G1_scaffold_248_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12175..13017
DNA (843bp) protein (281aa)
UPI0003D682C8 related cluster n=1 Tax=unknown RepID=UPI0003D682C8
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KHD14997.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L1_007_000G1_scaffold_248_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13088..13756)
DNA (669bp) protein (223aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN23_CLOSA
flavin reductase domain protein FMN-binding protein
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:AGX42209.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_000G1_scaffold_248_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13759..15051)
DNA (1293bp) protein (431aa)
UPI0003D668E6 related cluster n=1 Tax=unknown RepID=UPI0003D668E6
D-alanyl-D-alanine carboxypeptidase family {ECO:0000313|EMBL:ETI88550.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
serine-type D-Ala-D-Ala carboxypeptidase
L1_007_000G1_scaffold_248_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15268..15999)
DNA (732bp) protein (244aa)
Putative glutamine amidotransferase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRB9_CLOSA
putative glutamine amidotransferase
Putative glutamine amidotransferase {ECO:0000313|EMBL:AGX42221.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_000G1_scaffold_248_14
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16018..17376)
DNA (1359bp) protein (453aa)
murE1; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase MurE (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase MurE {ECO:0000313|EMBL:AGF54821.1}; EC=6.3.2.13 {ECO:0000313|EMBL:AGF54821.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase MurE n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJ05_9CLOT
L1_007_000G1_scaffold_248_15
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17738..19741
DNA (2004bp) protein (668aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002E36685
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L1_007_000G1_scaffold_248_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19925..22273
DNA (2349bp) protein (783aa)
Peptidase, U32 family n=3 Tax=Clostridium butyricum RepID=B1QTU7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35807.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
collagenase-like protease
L1_007_000G1_scaffold_248_17
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22280..22537
DNA (258bp) protein (86aa)
ABC-2 type transporter n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PU94_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
ABC-2 type transporter
L1_007_000G1_scaffold_248_18
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22661..23251)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U5C1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ56811.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L1_007_000G1_scaffold_248_19
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23580..24170)
DNA (591bp) protein (197aa)
Galactoside O-acetyltransferase {ECO:0000313|EMBL:EOR20883.1}; EC=2.3.1.18 {ECO:0000313|EMBL:EOR20883.1};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
lacA; galactoside O-acetyltransferase LacA (EC:2.3.1.18)
Galactoside O-acetyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BV13_9CLOT
L1_007_000G1_scaffold_248_20
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25218..27659
DNA (2442bp) protein (814aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Endonuclease MutS2 n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U0W4_9CLOT
mutS3; MutS2 protein MutS
L1_007_000G1_scaffold_248_21
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

27888..29165
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JQJ5_FUSVA
Uncharacterized protein {ECO:0000313|EMBL:EES62928.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
hypothetical protein
L1_007_000G1_scaffold_248_22
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29312..30079
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TZV3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ53531.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L1_007_000G1_scaffold_248_23
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30099..30353
DNA (255bp) protein (85aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68041.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L1_007_000G1_scaffold_248_24
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30435..31754
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7X7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89794.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
amino acid permease family protein
L1_007_000G1_scaffold_248_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31960..32499
DNA (540bp) protein (180aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium butyricum RepID=C4IHZ2_CLOBU
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEP54043.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
GNAT family acetyltransferase
L1_007_000G1_scaffold_248_26
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32667..33467
DNA (801bp) protein (267aa)
RelA/SpoT domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M284_9CLOT
RelA/SpoT domain protein {ECO:0000313|EMBL:EHI98866.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
RelA/SpoT domain protein
L1_007_000G1_scaffold_248_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33640..34119
DNA (480bp) protein (160aa)
Putative cell wall binding repeat-containing protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J9H8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92281.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
cell wall binding repeat-containing protein
L1_007_000G1_scaffold_248_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35325..36104
DNA (780bp) protein (260aa)
Metal-dependent phosphohydrolase, HD subdomain n=4 Tax=Clostridium butyricum RepID=B1QUP6_CLOBU
Metal-dependent phosphohydrolase, HD subdomain {ECO:0000313|EMBL:EEP55977.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L1_007_000G1_scaffold_248_29
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36216..36659)
DNA (444bp) protein (148aa)
Acetyltransferase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G5A7_CLOPA
Acetyltransferase {ECO:0000313|EMBL:ETD70862.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
GNAT family acetyltransferase
L1_007_000G1_scaffold_248_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36915..37334
DNA (420bp) protein (140aa)
MarR-family transcriptional regulator n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UWH7_CLOBO
MarR-family transcriptional regulator {ECO:0000313|EMBL:EES48858.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
MarR-family transcriptional regulator
Displaying items 1-30 of 95 in total

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