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L1_007_000G1_scaffold_284

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_284_1
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..616
DNA (615bp) protein (205aa)
Helix-turn-helix n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MSC3_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL36659.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L1_007_000G1_scaffold_284_2
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1247..1528)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKS3_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK78297.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L1_007_000G1_scaffold_284_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1542..1919)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKS4_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK78298.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L1_007_000G1_scaffold_284_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1973..3544)
DNA (1572bp) protein (524aa)
TraG/TraD family protein n=1 Tax=Clostridium bolteae 90A9 RepID=R0A9Q7_9CLOT
TraG/TraD family protein {ECO:0000313|EMBL:ENZ48781.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
TRAG family protein
L1_007_000G1_scaffold_284_5
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3541..4023)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90A9 RepID=R0BX27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ75257.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_007_000G1_scaffold_284_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4042..4677)
DNA (636bp) protein (212aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C0FN75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENZ48783.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L1_007_000G1_scaffold_284_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4688..5194)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C0FN76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95969.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L1_007_000G1_scaffold_284_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5208..6041)
DNA (834bp) protein (278aa)
ParB-like partition protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZL8_CLOSW
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:ADL06244.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_007_000G1_scaffold_284_9
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6058..6204)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HS99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJJ75261.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L1_007_000G1_scaffold_284_10
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6201..7046)
DNA (846bp) protein (282aa)
IstB-like ATP-binding protein n=2 Tax=Clostridiales RepID=C0FN78_9FIRM
IstB-like ATP-binding protein {ECO:0000313|EMBL:EEG95971.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
IstB domain-containing protein ATP-binding protein
L1_007_000G1_scaffold_284_11
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7043..7717)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90A9 RepID=R0BX29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ75263.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_007_000G1_scaffold_284_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7698..7865)
DNA (168bp) protein (56aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C0FN80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95973.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L1_007_000G1_scaffold_284_13
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7862..8692)
DNA (831bp) protein (277aa)
BRO family, N-terminal domain protein n=3 Tax=Clostridiales RepID=C0FN81_9FIRM
BRO family, N-terminal domain protein {ECO:0000313|EMBL:EEG95974.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
prophage antirepressor
L1_007_000G1_scaffold_284_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9126..9524)
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2V8_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
SSU ribosomal protein S9P
L1_007_000G1_scaffold_284_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9542..9970)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2V9_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
LSU ribosomal protein L13P
L1_007_000G1_scaffold_284_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10258..10827
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97694.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000G1_scaffold_284_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10824..11624
DNA (801bp) protein (267aa)
PP-loop family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2W1_9FIRM
PP-loop family protein {ECO:0000313|EMBL:EEU97695.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L1_007_000G1_scaffold_284_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11605..12810
DNA (1206bp) protein (402aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2W2_9FIRM
L1_007_000G1_scaffold_284_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12833..14644
DNA (1812bp) protein (604aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Elongation factor 4 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2W3_9FIRM
GTP-binding protein LepA
L1_007_000G1_scaffold_284_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14751..16148)
DNA (1398bp) protein (466aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXN3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98782.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000G1_scaffold_284_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16169..16534)
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXN4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98783.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000G1_scaffold_284_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16653..16874
DNA (222bp) protein (74aa)
Transcriptional regulator, XRE family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXN8_9FIRM
transcriptional regulator, XRE family
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CBK98787.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_000G1_scaffold_284_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16942..17223)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2W5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97699.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_000G1_scaffold_284_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17235..17669)
DNA (435bp) protein (145aa)
Repeat protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2W6_9FIRM
Repeat protein {ECO:0000313|EMBL:EEU97700.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_000G1_scaffold_284_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17695..19080)
DNA (1386bp) protein (462aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2W7_9FIRM
L1_007_000G1_scaffold_284_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19310..20386
DNA (1077bp) protein (359aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2X1_9FIRM
L1_007_000G1_scaffold_284_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20376..21101
DNA (726bp) protein (242aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2X2_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU97706.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000G1_scaffold_284_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21111..22430
DNA (1320bp) protein (440aa)
Citrate transporter n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2X3_9FIRM
Citrate transporter {ECO:0000313|EMBL:EEU97707.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Na+/H+ antiporter NhaD and related arsenite permeases
L1_007_000G1_scaffold_284_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22554..24032)
DNA (1479bp) protein (493aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13)
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2X4_9FIRM
L1_007_000G1_scaffold_284_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24048..25715)
DNA (1668bp) protein (556aa)
POTRA domain protein, FtsQ-type n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2X5_9FIRM
POTRA domain protein, FtsQ-type {ECO:0000313|EMBL:EEU97709.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Cell division septal protein
Displaying items 1-30 of 97 in total

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