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L1_007_000G1_scaffold_301

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_301_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(345..2048)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MJX2_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEP52540.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L1_007_000G1_scaffold_301_2
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2048..2641)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LPD2_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR32212.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L1_007_000G1_scaffold_301_3
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2872..3519
DNA (648bp) protein (216aa)
hemolysin n=1 Tax=Clostridium beijerinckii RepID=UPI0002FCFE3D
hemolysin III family channel protein
Channel protein, hemolysin III family {ECO:0000313|EMBL:ABR32213.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L1_007_000G1_scaffold_301_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3599..4957)
DNA (1359bp) protein (453aa)
Membrane protein n=4 Tax=Clostridium butyricum RepID=B1R211_CLOBU
Membrane protein {ECO:0000313|EMBL:EEP52542.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
membrane protein
L1_007_000G1_scaffold_301_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5213..6031
DNA (819bp) protein (273aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
proB; glutamate 5-kinase ProB (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F290_9CLOT
L1_007_000G1_scaffold_301_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6068..7312
DNA (1245bp) protein (415aa)
proA; gamma-glutamyl phosphate reductase ProA (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Gamma-glutamyl phosphate reductase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKQ4_CLOSA
L1_007_000G1_scaffold_301_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7488..7745
DNA (258bp) protein (86aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0AC18_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84301.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L1_007_000G1_scaffold_301_8
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8218..9267
DNA (1050bp) protein (350aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
carA; carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBP8_9CLOT
L1_007_000G1_scaffold_301_9
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9280..12492
DNA (3213bp) protein (1071aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
UPI0003D5EF44 related cluster n=1 Tax=unknown RepID=UPI0003D5EF44
L1_007_000G1_scaffold_301_10
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12709..13281
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XWI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00274.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
L1_007_000G1_scaffold_301_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13412..14098
DNA (687bp) protein (229aa)
UPI0003D5CFA7 related cluster n=1 Tax=unknown RepID=UPI0003D5CFA7
Uncharacterized protein {ECO:0000313|EMBL:ETI91448.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L1_007_000G1_scaffold_301_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14270..14506
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R204_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52508.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L1_007_000G1_scaffold_301_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14556..15665)
DNA (1110bp) protein (370aa)
rpfG1; cyclic di-GMP phosphodiesterase response regulator RpfG (EC:3.1.4.52)
Cyclic di-GMP phosphodiesterase response regulator RpfG {ECO:0000313|EMBL:AGX41120.1}; EC=3.1.4.52 {ECO:0000313|EMBL:AGX41120.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Cyclic di-GMP phosphodiesterase response regulator RpfG n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKI2_CLOSA
L1_007_000G1_scaffold_301_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15777..17777)
DNA (2001bp) protein (667aa)
Glutamine synthetase, clostridia type {ECO:0000313|EMBL:KJZ84651.1}; EC=6.3.1.2 {ECO:0000313|EMBL:KJZ84651.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
GlnA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JFS8_CLOBU
glutamine synthetase
L1_007_000G1_scaffold_301_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17972..18748
DNA (777bp) protein (259aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
murI; glutamate racemase MurI (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TL74_9CLOT
L1_007_000G1_scaffold_301_16
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18832..19356
DNA (525bp) protein (175aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
rotA; peptidyl-prolyl cis-trans isomerase A (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXD1_9CLOT
L1_007_000G1_scaffold_301_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19515..19886
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKR4_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41123.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_000G1_scaffold_301_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19890..20561
DNA (672bp) protein (224aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MJY8_CLOSA
helix-turn-helix domain protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AGX41124.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_000G1_scaffold_301_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20694..24401
DNA (3708bp) protein (1236aa)
Peptidase, family S8 and S53 {ECO:0000313|EMBL:EES49155.1}; EC=3.4.21.- {ECO:0000313|EMBL:EES49155.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
Peptidase, family S8 and S53 n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UV85_CLOBO
subtilisin like protease
L1_007_000G1_scaffold_301_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24462..25784
DNA (1323bp) protein (441aa)
UPI0003D680D0 related cluster n=1 Tax=unknown RepID=UPI0003D680D0
Spore cortex-lytic enzyme pre-pro-form {ECO:0000313|EMBL:ETI91770.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
spore cortex-lytic protein
L1_007_000G1_scaffold_301_21
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25895..26800)
DNA (906bp) protein (302aa)
Iron-sulfur protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FSW6_CLOPA
Iron-sulfur protein {ECO:0000313|EMBL:ETD67394.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
radical SAM domain containing protein
L1_007_000G1_scaffold_301_22
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26898..27980)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNW9_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41127.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_000G1_scaffold_301_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28224..29150
DNA (927bp) protein (309aa)
Radical SAM protein, family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JFR9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD15127.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
radical SAM protein
L1_007_000G1_scaffold_301_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29476..30189
DNA (714bp) protein (238aa)
Probable 2-phosphosulfolactate phosphatase {ECO:0000256|HAMAP-Rule:MF_00490}; EC=3.1.3.71 {ECO:0000256|HAMAP-Rule:MF_00490};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
comB; 2-phosphosulfolactate phosphatase ComB (EC:3.1.3.71)
Probable 2-phosphosulfolactate phosphatase n=3 Tax=Clostridium butyricum RepID=B1R1Z1_CLOBU
L1_007_000G1_scaffold_301_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30239..30463)
DNA (225bp) protein (75aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1R1Y9_CLOBU
BFD domain protein (2Fe-2S)-binding domain protein {ECO:0000313|EMBL:KJZ84662.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NAD(P)H-nitrite reductase
L1_007_000G1_scaffold_301_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30653..31336
DNA (684bp) protein (228aa)
Transcriptional regulatory protein CiaR n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN67_CLOSA
ciaR; transcriptional regulatory protein CiaR
Transcriptional regulatory protein CiaR {ECO:0000313|EMBL:AGX41131.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_007_000G1_scaffold_301_27
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31340..32629
DNA (1290bp) protein (430aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) PF3_CLOB8">RepID=A6LPF3_CLOB8
integral membrane sensor signal transduction histidine kinase
L1_007_000G1_scaffold_301_28
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32777..33463
DNA (687bp) protein (229aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R1Y6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92810.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
VTC domain superfamily
L1_007_000G1_scaffold_301_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33496..34185
DNA (690bp) protein (230aa)
Putative membrane protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUU2_CLOBO
twin-arginine translocating C-subunit
Putative membrane protein {ECO:0000313|EMBL:EES49205.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L1_007_000G1_scaffold_301_30
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34297..34668)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TCE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ57603.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
Displaying items 1-30 of 91 in total

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