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L1_007_000G1_scaffold_309

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_309_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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59..1132
DNA (1074bp) protein (358aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CLN3_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI68191.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
phage integrase family protein
L1_007_000G1_scaffold_309_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1248..2555)
DNA (1308bp) protein (436aa)
GMP synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00008728}; EC=6.3.5.2 {ECO:0000256|SAAS:SAAS00008728};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
GMP synthase (Glutamine-hydrolyzing) domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESI2_9FIRM
GMP synthase
L1_007_000G1_scaffold_309_3
unknown

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comp(2552..3169)
DNA (618bp) protein (206aa)

This feature has no annotations

L1_007_000G1_scaffold_309_4
unknown

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3322..3927
DNA (606bp) protein (202aa)

This feature has no annotations

L1_007_000G1_scaffold_309_5
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3858..4418)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y1Q6_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV46087.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
NADPH-dependent FMN reductase
L1_007_000G1_scaffold_309_6
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4453..5649)
DNA (1197bp) protein (399aa)
Peptidase dimerization domain protein n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QKM6_9BURK
Peptidase dimerization domain protein {ECO:0000313|EMBL:EGG54281.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
putative peptidic bond hydrolase
L1_007_000G1_scaffold_309_7
unknown

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comp(6363..6551)
DNA (189bp) protein (63aa)

This feature has no annotations

L1_007_000G1_scaffold_309_8
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(7553..8464)
DNA (912bp) protein (304aa)
HMGL-like protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDK2_FUSMR
HMGL-like protein {ECO:0000313|EMBL:EEO35958.1}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
putative hydroxymethylglutaryl-CoA lyase
L1_007_000G1_scaffold_309_9
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8594..9784)
DNA (1191bp) protein (397aa)
Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF {ECO:0000313|EMBL:KJJ69101.1}; EC=2.8.3.15 {ECO:0000313|EMBL:KJJ69101.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKL8_9CLOT
CAIB/BAIF family protein
L1_007_000G1_scaffold_309_10
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10357..11877)
DNA (1521bp) protein (507aa)
SSS sodium solute transporter superfamily n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DLG4_9FIRM
SSS sodium solute transporter superfamily protein
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:AEF95488.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 /; CO-1-SRB).;"
L1_007_000G1_scaffold_309_11
unknown

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comp(11989..12108)
DNA (120bp) protein (40aa)

This feature has no annotations

L1_007_000G1_scaffold_309_12
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12372..13364)
DNA (993bp) protein (331aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase id=1922235 bin=GWE2_Bacteroidetes_32_14 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_48_10_curated
L1_007_000G1_scaffold_309_13
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13397..14782)
DNA (1386bp) protein (462aa)
Amidohydrolase n=1 Tax=Clostridium sp. CAG:632 RepID=R5JTP2_9CLOT
Amidohydrolase {ECO:0000313|EMBL:CCY57918.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
amidohydrolase
L1_007_000G1_scaffold_309_14
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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comp(14935..16164)
DNA (1230bp) protein (410aa)
NADPH-dependent glutamate synthase (EC:1.8.1.-)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000364CA98
Tax=GWA2_Elusimicrobia_69_24_curated
L1_007_000G1_scaffold_309_15
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16179..17378)
DNA (1200bp) protein (400aa)
dihydrolipoyl dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Clostridium sp. CAG:632 RepID=R5KA81_9CLOT
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:CCY57917.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
L1_007_000G1_scaffold_309_16
Bacillus simplex, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(17450..17947)
DNA (498bp) protein (166aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1478 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus simplex.;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Edwardsiella tarda C07-087 RepID=M4TJA4_EDWTA
3-isopropylmalate dehydratase small subunit 1, putative
L1_007_000G1_scaffold_309_17
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(17973..19235)
DNA (1263bp) protein (421aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRB9_9FIRM
L1_007_000G1_scaffold_309_18
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19334..19912)
DNA (579bp) protein (193aa)
Putative secreted protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5JYW1_9CLOT
Putative secreted protein {ECO:0000313|EMBL:CCY57944.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
Hypothetical protein
L1_007_000G1_scaffold_309_19
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20012..21400)
DNA (1389bp) protein (463aa)
MmgE/PrpD family protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5JU83_9CLOT
MmgE/PrpD family protein {ECO:0000313|EMBL:CCY57920.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
MmgE/PrpD family protein
L1_007_000G1_scaffold_309_20
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21421..22581)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2J9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG73623.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L1_007_000G1_scaffold_309_21
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(22598..23524)
DNA (927bp) protein (309aa)
arcC; carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ65_9FIRM
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L1_007_000G1_scaffold_309_22
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23637..24467)
DNA (831bp) protein (277aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J4S3_DESRM
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ABO50076.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
L1_007_000G1_scaffold_309_23
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(24470..26137)
DNA (1668bp) protein (556aa)
NCS1 nucleoside transporter family id=2982115 bin=GWF2_Ignavibacteria_35_20 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
NCS1 nucleoside transporter
Tax=GWC2_Ignavibacteria_rel_36_12_curated
L1_007_000G1_scaffold_309_24
unknown

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comp(26714..26815)
DNA (102bp) protein (34aa)

This feature has no annotations

L1_007_000G1_scaffold_309_25
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26812..27870)
DNA (1059bp) protein (353aa)
LacI family transcriptional regulator (EC:5.1.1.1)
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABX40982.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ABX40982.1};; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Transcriptional regulator, LacI family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIY3_CLOPH
L1_007_000G1_scaffold_309_26
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28193..29374
DNA (1182bp) protein (394aa)
Amidohydrolase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTG4_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:KIE47813.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
peptidase
L1_007_000G1_scaffold_309_27
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29944..30369)
DNA (426bp) protein (142aa)
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR02705.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KIR02705.1};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
V-type ATP synthase subunit K n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LLF3_TREBD
V-type ATP synthase subunit K
L1_007_000G1_scaffold_309_28
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30391..32307)
DNA (1917bp) protein (639aa)
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR02704.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KIR02704.1};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
V-type ATPase 116 kDa subunit n=1 Tax=Treponema saccharophilum DSM 2985 RepID=H7EML8_9SPIO
V-type ATPase 116 kDa subunit
L1_007_000G1_scaffold_309_29
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(32304..32936)
DNA (633bp) protein (211aa)
V-type ATP synthase subunit D n=2 Tax=Treponema socranskii RepID=S3JMM7_TRESO
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
V-type ATP synthase subunit D
L1_007_000G1_scaffold_309_30
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32950..34245)
DNA (1296bp) protein (432aa)
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR02702.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KIR02702.1};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
ATP synthase subunit B (EC:3.6.3.14)
H+transporting two-sector ATPase alpha/beta subunit central region n=1 Tax=Treponema saccharophilum DSM 2985 RepID=H7EMM0_9SPIO
Displaying items 1-30 of 91 in total

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