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L1_007_000G1_scaffold_330

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Displaying items 1-30 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_330_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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409..1230
DNA (822bp) protein (274aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Hydroxyethylthiazole kinase, sugar kinase family (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Clostridium sp. D5 RepID=F0YYM1_9CLOT
L1_007_000G1_scaffold_330_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1217..1900
DNA (684bp) protein (228aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Clostridium sp. D5 RepID=F0YYM2_9CLOT
L1_007_000G1_scaffold_330_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1897..2574
DNA (678bp) protein (226aa)
Putative phosphatase n=1 Tax=Clostridium sp. D5 RepID=F0YYM3_9CLOT
Putative phosphatase {ECO:0000313|EMBL:EGB93325.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L1_007_000G1_scaffold_330_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2692..3519
DNA (828bp) protein (276aa)
Phosphomethylpyrimidine kinase n=1 Tax=Clostridium sp. D5 RepID=F0YYM4_9CLOT
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EGB93326.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
phosphomethylpyrimidine kinase
L1_007_000G1_scaffold_330_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3522..4724
DNA (1203bp) protein (401aa)
Putative hydroxymethylpyrimidine transporter CytX n=1 Tax=Clostridium sp. D5 RepID=F0YYM5_9CLOT
Putative hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:EGB93327.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
probable hydroxymethylpyrimidine transporter CytX
L1_007_000G1_scaffold_330_6
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4819..5715
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YYM6_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93328.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_330_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5791..6675)
DNA (885bp) protein (295aa)
Proline iminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; Short=PIP {ECO:0000256|PIRNR:PIRNR005539};; EC=3.4.11.5 {ECO:0000256|PIRNR:PIRNR005539};; Prolyl aminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Proline iminopeptidase n=1 Tax=Clostridium sp. D5 RepID=F0YYM7_9CLOT
proline-specific peptidase
L1_007_000G1_scaffold_330_8
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6910..7188
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GMF4_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36894.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_007_000G1_scaffold_330_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7263..8957
DNA (1695bp) protein (565aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YZB0_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB92765.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
6-pyruvoyl-tetrahydropterin synthase related domain, membrane family protein
L1_007_000G1_scaffold_330_10
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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8989..9906
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9JVI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38185.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
sugar dehydratase, associated with anaerobic toluene degradation
L1_007_000G1_scaffold_330_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10557..11138
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YYN3_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93335.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_000G1_scaffold_330_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11194..11841
DNA (648bp) protein (216aa)
DNA-binding response regulator n=1 Tax=Clostridium sp. D5 RepID=F0YYN4_9CLOT
DNA-binding response regulator {ECO:0000313|EMBL:EGB93336.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
two component transcriptional regulator, winged helix family
L1_007_000G1_scaffold_330_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11843..12952
DNA (1110bp) protein (370aa)
Putative His Kinase A (Phosphoacceptor) domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YYN5_9CLOT
Putative His Kinase A (Phosphoacceptor) domain protein {ECO:0000313|EMBL:EGB93337.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
signal transduction histidine kinase
L1_007_000G1_scaffold_330_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13085..13948
DNA (864bp) protein (288aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Methylenetetrahydrofolate reductase n=1 Tax=Clostridium sp. D5 RepID=F0YYN6_9CLOT
5,10-methylenetetrahydrofolate reductase
L1_007_000G1_scaffold_330_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13965..14888)
DNA (924bp) protein (308aa)
Transcriptional regulator CpsY n=1 Tax=Clostridium sp. D5 RepID=F0YYN7_9CLOT
Transcriptional regulator CpsY {ECO:0000313|EMBL:EGB93339.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
LysR-type transcriptional regulator
L1_007_000G1_scaffold_330_16
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15082..15645
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG30529.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L1_007_000G1_scaffold_330_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15807..17048
DNA (1242bp) protein (414aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YYN8_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93340.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_330_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17163..18368
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YYN9_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93341.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_330_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18492..19367
DNA (876bp) protein (292aa)
Sugar kinases, ribokinase family (EC:2.7.1.15)
Ribokinase n=1 Tax=Clostridium sp. D5 RepID=F0YYP0_9CLOT
Ribokinase {ECO:0000313|EMBL:EGB93342.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_000G1_scaffold_330_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20566..22095
DNA (1530bp) protein (510aa)
Na+/H+ antiporter family protein n=1 Tax=Clostridium sp. D5 RepID=F0YYP2_9CLOT
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EGB93344.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transporter, NhaC family (TC 2.A.35)
L1_007_000G1_scaffold_330_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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22082..22699
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JWX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47731.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L1_007_000G1_scaffold_330_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22752..23762)
DNA (1011bp) protein (337aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
aspartate--ammonia ligase, AsnA-type (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Clostridium sp. D5 RepID=F0YYP3_9CLOT
L1_007_000G1_scaffold_330_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24416..25468
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YYP4_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93346.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_330_24
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25499..26482
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YYP5_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93347.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_330_25
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26615..26818
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YYP6_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93348.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_000G1_scaffold_330_26
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26970..27800
DNA (831bp) protein (277aa)
Isoleucine--tRNA ligase n=1 Tax=Clostridium sp. D5 RepID=F0YYP7_9CLOT
Isoleucine--tRNA ligase {ECO:0000313|EMBL:EGB93349.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted metal-dependent phosphoesterases (PHP family)
L1_007_000G1_scaffold_330_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27831..28715)
DNA (885bp) protein (295aa)
Putative transcriptional regulator, AraC family n=1 Tax=Clostridium sp. D5 RepID=F0YYP8_9CLOT
Putative transcriptional regulator, AraC family {ECO:0000313|EMBL:EGB93350.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
AraC-type DNA-binding domain-containing proteins
L1_007_000G1_scaffold_330_28
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28920..31172
DNA (2253bp) protein (751aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium sp. D5 RepID=F0YYP9_9CLOT
L1_007_000G1_scaffold_330_29
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31518..32879
DNA (1362bp) protein (454aa)
Maltose-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YYQ0_9CLOT
Maltose-binding protein {ECO:0000313|EMBL:EGB93352.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
extracellular solute-binding protein
L1_007_000G1_scaffold_330_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32949..33791
DNA (843bp) protein (281aa)
Putative starch degradation products transport system permease proteinamyD n=1 Tax=Clostridium sp. D5 RepID=F0YYQ1_9CLOT
Putative starch degradation products transport system permease proteinamyD {ECO:0000313|EMBL:EGB93353.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter permease
Displaying items 1-30 of 151 in total

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