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L1_007_000G1_scaffold_334

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_334_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(334..1614)
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75654.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_000G1_scaffold_334_2
unknown

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comp(1611..2105)
DNA (495bp) protein (165aa)

This feature has no annotations

L1_007_000G1_scaffold_334_3
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2111..3121)
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVA9_9FIRM
Aldo/keto reductase {ECO:0000313|EMBL:KJF39769.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Predicted oxidoreductases of the aldo/keto reductase family
L1_007_000G1_scaffold_334_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3246..4121
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67851.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_000G1_scaffold_334_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4208..4696)
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67852.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_000G1_scaffold_334_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4928..5557
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67853.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_000G1_scaffold_334_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5685..5996
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67854.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_000G1_scaffold_334_8
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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6042..7094
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39775.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
H+transporting two-sector ATPase C (AC39) subunit
L1_007_000G1_scaffold_334_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7141..9093
DNA (1953bp) protein (651aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67856.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_000G1_scaffold_334_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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9164..9499
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39776.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ntpK; cation exporting V-type ATPase, subunit K
L1_007_000G1_scaffold_334_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9504..9812
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67858.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Vacuolar H+transporting two-sector ATPase F subunit
L1_007_000G1_scaffold_334_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9823..10452
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67859.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_000G1_scaffold_334_13
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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10498..12285
DNA (1788bp) protein (596aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
atpA; V-type ATP synthase alpha chain (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVB9_9FIRM
L1_007_000G1_scaffold_334_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12291..13664
DNA (1374bp) protein (458aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVC0_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_000G1_scaffold_334_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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13704..14315
DNA (612bp) protein (204aa)
V-type ATP synthase subunit D n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVC1_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
V-type ATPase subunit D
L1_007_000G1_scaffold_334_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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14528..15016
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67863.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
MarR family transcriptional regulator
L1_007_000G1_scaffold_334_17
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15021..17222
DNA (2202bp) protein (734aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CV21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79470.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC transport system ATP-binding/permease protein
L1_007_000G1_scaffold_334_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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17222..19072
DNA (1851bp) protein (617aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67865.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC transporter ATPase/permease
L1_007_000G1_scaffold_334_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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19355..20875
DNA (1521bp) protein (507aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69504.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_000G1_scaffold_334_20
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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20872..21546
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40149.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_000G1_scaffold_334_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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22088..22969
DNA (882bp) protein (294aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJP0_9FIRM
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EFB76988.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
family 3 extracellular solute-binding protein
L1_007_000G1_scaffold_334_22
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23018..23887
DNA (870bp) protein (290aa)
Amino acid ABC transporter amino acid-binding protein/permease protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T9P3_9CLOT
Amino acid ABC transporter amino acid-binding protein/permease protein {ECO:0000313|EMBL:CCZ62398.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
polar amino acid ABC transporter inner membrane subunit
L1_007_000G1_scaffold_334_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23891..24628
DNA (738bp) protein (246aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB76986.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC transporter
L1_007_000G1_scaffold_334_24
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25195..25476)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GHN6_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO35194.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_007_000G1_scaffold_334_25
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25507..27222)
DNA (1716bp) protein (572aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZC1_9FIRM
PtsA; phosphoenolpyruvate-protein kinase
L1_007_000G1_scaffold_334_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27219..27908)
DNA (690bp) protein (230aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Pentose-5-phosphate-3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VZP2_9CLOT
L1_007_000G1_scaffold_334_27
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

Not on your lists

28221..28985
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5ZCZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA34484.1}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
DeoR family transcriptional regulator
L1_007_000G1_scaffold_334_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(29056..30018)
DNA (963bp) protein (321aa)
Putative transketolase n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp126 RepID=S2R9X9_LACPA
Putative transketolase {ECO:0000313|EMBL:EPC74050.1}; TaxID=1256206 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp126.;"
putative transketolase
L1_007_000G1_scaffold_334_29
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30023..30871)
DNA (849bp) protein (283aa)
transketolase subunit A (EC:2.2.1.1)
Transketolase, thiamine diphosphate binding domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LTX6_9CLOT
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EFR37785.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L1_007_000G1_scaffold_334_30
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30931..32016)
DNA (1086bp) protein (362aa)
Sugar isomerase (SIS) n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R1L9_CLOSW
Glucosamine 6-phosphate synthetase {ECO:0000313|EMBL:EXG83885.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
sugar isomerase (SIS)
Displaying items 1-30 of 88 in total

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