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L1_007_000G1_scaffold_357

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_357_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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918..1382
DNA (465bp) protein (155aa)
Putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R698_CLOSW
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
Putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily {ECO:0000313|EMBL:ADL05308.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_007_000G1_scaffold_357_2
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1953..2324
DNA (372bp) protein (124aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
mRNA interferase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LNU7_9FIRM
PemK family transcriptional regulator
L1_007_000G1_scaffold_357_3
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2370..2534
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MHY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67452.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L1_007_000G1_scaffold_357_4
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2661..4253
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LVP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62628.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
resolvase, n-terminal:recombinase
L1_007_000G1_scaffold_357_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4253..4996
DNA (744bp) protein (248aa)
Recombinase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CJ37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54121.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative recombinase
L1_007_000G1_scaffold_357_6
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4993..6633
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M9U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67456.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
resolvase, n-terminal:recombinase
L1_007_000G1_scaffold_357_7
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7273..7734
DNA (462bp) protein (154aa)
low molecular weight protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine phosphatase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M0X3_9FIRM
Protein-tyrosine phosphatase {ECO:0000313|EMBL:EOS64640.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L1_007_000G1_scaffold_357_8
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

8015..9256
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TZF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77560.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L1_007_000G1_scaffold_357_9
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9719..10468
DNA (750bp) protein (250aa)
Transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2V0Y8_CLOBA
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDZ23886.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L1_007_000G1_scaffold_357_10
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10519..11736
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KKU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44122.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
nucleoside-binding protein
L1_007_000G1_scaffold_357_11
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11768..13444
DNA (1677bp) protein (559aa)
ribose import ATP-binding protein RbsA (EC:3.6.3.17)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KCR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44123.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L1_007_000G1_scaffold_357_12
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13441..14535
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KCF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44124.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
sugar ABC transporter permease
L1_007_000G1_scaffold_357_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14532..15446
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BS96_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17954.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
inner-membrane translocator
L1_007_000G1_scaffold_357_14
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15466..16056
DNA (591bp) protein (197aa)
Isochorismatase hydrolase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FPZ0_9CLOT
Isochorismatase hydrolase {ECO:0000313|EMBL:EMS72401.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
nicotinamidase-like amidase
L1_007_000G1_scaffold_357_15
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16056..17027
DNA (972bp) protein (324aa)
Kinase, PfkB family n=3 Tax=root RepID=C0B5N7_9FIRM
Kinase PfkB family {ECO:0000313|EMBL:CDB84392.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
kinase, PfkB family
L1_007_000G1_scaffold_357_16
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17029..17784
DNA (756bp) protein (252aa)
Phosphorylase family n=2 Tax=Coprococcus RepID=C0B5N8_9FIRM
Phosphorylase family {ECO:0000313|EMBL:EEG91202.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
uridine phosphorylase
L1_007_000G1_scaffold_357_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17833..18627
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V0X8_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES47747.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L1_007_000G1_scaffold_357_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18712..19866
DNA (1155bp) protein (385aa)
NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:EES47746.1}; EC=1.1.1.- {ECO:0000313|EMBL:EES47746.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
NADPH-dependent butanol dehydrogenase (EC:1.1.1.-)
NADPH-dependent butanol dehydrogenase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UZM6_CLOBO
L1_007_000G1_scaffold_357_19
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19871..20587
DNA (717bp) protein (239aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00108586}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00108586};; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KCF7_9FIRM
tryptophan synthase subunit alpha
L1_007_000G1_scaffold_357_20
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20601..21092
DNA (492bp) protein (164aa)
Glyoxalase family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T7_9FIRM
Glyoxalase family protein {ECO:0000313|EMBL:EDS12333.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
L1_007_000G1_scaffold_357_21
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21542..22558
DNA (1017bp) protein (339aa)
Transcriptional regulator, LacI family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T6_9FIRM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDS12332.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
transcriptional regulator
L1_007_000G1_scaffold_357_22
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22627..23379
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12331.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_007_000G1_scaffold_357_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23413..24396
DNA (984bp) protein (328aa)
Sugar-binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T4_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EDS12330.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
sugar ABC transporter periplasmic protein
L1_007_000G1_scaffold_357_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24464..25960
DNA (1497bp) protein (499aa)
ABC transporter, ATP-binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS12329.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ABC transporter protein, ATP binding component
L1_007_000G1_scaffold_357_25
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25953..26966
DNA (1014bp) protein (338aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T2_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDS12328.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ribose ABC transporter permease
L1_007_000G1_scaffold_357_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26963..28201
DNA (1239bp) protein (413aa)
Peptidase, ArgE/DapE family {ECO:0000313|EMBL:EDS12327.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDS12327.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Peptidase, ArgE/DapE family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T1_9FIRM
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
L1_007_000G1_scaffold_357_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28264..28830)
DNA (567bp) protein (189aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Probable RNA 2'-phosphotransferase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T0_9FIRM
phosphotransferase KptA/Tpt1
L1_007_000G1_scaffold_357_28
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28830..29660)
DNA (831bp) protein (277aa)
TIGR02452 family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8S9_9FIRM
TIGR02452 family protein {ECO:0000313|EMBL:EDS12325.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_007_000G1_scaffold_357_29
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29697..30431)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12309.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_007_000G1_scaffold_357_30
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30444..30998)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12308.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
Displaying items 1-30 of 88 in total

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