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L1_007_000G1_scaffold_370

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Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_370_1
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(281..1405)
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYL7_9FIRM
Aminotransferase {ECO:0000313|EMBL:KJF41395.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
transaminase
L1_007_000G1_scaffold_370_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1440..2270)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64779.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
NLP/P60 protein
L1_007_000G1_scaffold_370_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2267..3061)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64780.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
beta-lactamase class A
L1_007_000G1_scaffold_370_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3064..3981)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYM0_9FIRM
Peptidase S66 {ECO:0000313|EMBL:KJF41397.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
peptidase U61, LD-carboxypeptidase A
L1_007_000G1_scaffold_370_5
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4188..5120)
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYM1_9FIRM
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJF41398.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
oppF; oligopeptide ABC transporter (ATP-binding protein)
L1_007_000G1_scaffold_370_6
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5117..6154)
DNA (1038bp) protein (346aa)
peptide ABC transporter ATPase (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYM2_9FIRM
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJF41399.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_000G1_scaffold_370_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6170..7189)
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64784.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC-type transporter, integral membrane subunit
L1_007_000G1_scaffold_370_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7189..8136)
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64785.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
binding-protein-dependent transport system inner membrane protein
L1_007_000G1_scaffold_370_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8312..10234)
DNA (1923bp) protein (641aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYM5_9FIRM
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJF41402.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
family 5 extracellular solute-binding protein
L1_007_000G1_scaffold_370_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10387..11469)
DNA (1083bp) protein (361aa)
O-succinylbenzoic acid (OSB) synthetase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYM6_9FIRM
L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:KJF41403.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
mandelate racemase/muconate lactonizing protein
L1_007_000G1_scaffold_370_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11588..12367)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64788.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
beta-lactamase
L1_007_000G1_scaffold_370_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12582..13616)
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64789.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
glutamyl aminopeptidase M42 family protein
L1_007_000G1_scaffold_370_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13842..14540)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64790.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
lipase/acylhydrolase
L1_007_000G1_scaffold_370_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14715..15299
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41406.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_000G1_scaffold_370_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15318..15542
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z830_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75047.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_000G1_scaffold_370_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16162..16680
DNA (519bp) protein (173aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY79_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHL64792.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ECF subfamily RNA polymerase sigma-24 subunit
L1_007_000G1_scaffold_370_17
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16664..18031
DNA (1368bp) protein (456aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64793.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_000G1_scaffold_370_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18166..20019)
DNA (1854bp) protein (618aa)
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Heavy metal translocating P-type ATPase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY81_9FIRM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EHL64794.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_000G1_scaffold_370_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20059..20277)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY82_9FIRM
Heavy metal transporter {ECO:0000313|EMBL:KJF41409.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Cation transport ATPase
L1_007_000G1_scaffold_370_20
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20311..20670)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY83_9FIRM
ArsR family transcriptional regulator {ECO:0000313|EMBL:KJF41410.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_000G1_scaffold_370_21
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21280..24453
DNA (3174bp) protein (1058aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
TIGR00375 family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY84_9FIRM
UvrD/REP helicase
L1_007_000G1_scaffold_370_22
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24551..25756)
DNA (1206bp) protein (402aa)
L-threonine ammonia-lyase (EC:4.3.1.19)
Threonine dehydratase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY85_9FIRM
Threonine dehydratase {ECO:0000313|EMBL:EHL64798.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_000G1_scaffold_370_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25910..27097
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64799.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Predicted ATPase (AAA+ superfamily)
L1_007_000G1_scaffold_370_24
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27179..28180)
DNA (1002bp) protein (334aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Ketol-acid reductoisomerase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY87_9FIRM
ilvC; ketol acid reductoisomerase
L1_007_000G1_scaffold_370_25
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28251..28745)
DNA (495bp) protein (165aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY88_9FIRM
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EHL64801.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_000G1_scaffold_370_26
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28759..30423)
DNA (1665bp) protein (555aa)
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY89_9FIRM
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:EHL64802.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_000G1_scaffold_370_27
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30966..32699
DNA (1734bp) protein (578aa)
beta-galactosidase (EC:3.2.1.23)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41417.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_000G1_scaffold_370_28
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32701..34761
DNA (2061bp) protein (687aa)
Hydrolase CocE/NonD family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY91_9FIRM
Esterase {ECO:0000313|EMBL:KJF41418.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
esterase
L1_007_000G1_scaffold_370_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34844..37240
DNA (2397bp) protein (799aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64805.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_000G1_scaffold_370_30
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37331..38560)
DNA (1230bp) protein (410aa)
Collagenase and related proteases (EC:3.4.-.-)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY93_9FIRM
Peptidase U32 {ECO:0000313|EMBL:KJF41420.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Displaying items 1-30 of 98 in total

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