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L1_007_000G1_scaffold_378

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_378_1
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..982
DNA (981bp) protein (327aa)
Transposase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IP96_9FIRM
Transposase {ECO:0000313|EMBL:EQB24637.1}; Transposase for insertion sequence element ISRM3 {ECO:0000313|EMBL:EQB27626.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
transposase mutator type
L1_007_000G1_scaffold_378_2
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1548..3191)
DNA (1644bp) protein (548aa)
Methyltransferase type 12 n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B1P6_TURPD
Uncharacterized protein {ECO:0000313|EMBL:KHD05472.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Methyltransferase type 12
L1_007_000G1_scaffold_378_3
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(3262..4011)
DNA (750bp) protein (250aa)
DNA methylase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N0H0_9FIRM
DNA methylase {ECO:0000313|EMBL:CDB99851.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
DNA methylase.
L1_007_000G1_scaffold_378_4
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4011..4550)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BK85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61209.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L1_007_000G1_scaffold_378_5
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4552..5208)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B564A5
Uncharacterized protein {ECO:0000313|EMBL:CCY00102.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L1_007_000G1_scaffold_378_6
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5342..5494)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UHG8_RUMA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU21213.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L1_007_000G1_scaffold_378_7
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5510..6679)
DNA (1170bp) protein (390aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
DNA adenine methylase n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NIC8_9FIRM
DNA adenine methylase
L1_007_000G1_scaffold_378_8
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6791..7783
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NHZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ03378.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L1_007_000G1_scaffold_378_9
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7798..11340
DNA (3543bp) protein (1181aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NGT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ03380.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L1_007_000G1_scaffold_378_10

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11337..13403
DNA (2067bp) protein (689aa)
ATPase (Fragment) n=1 Tax=human gut metagenome RepID=K1SX06_9ZZZZ
ATPase {ECO:0000313|EMBL:EKC58350.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000G1_scaffold_378_11
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14059..14421)
DNA (363bp) protein (121aa)
Putative viral replication protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E0Z7_9FIRM
Putative viral replication protein {ECO:0000313|EMBL:CCX81906.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Putative viral replication protein.
L1_007_000G1_scaffold_378_12
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14629..15624)
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6H3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15218.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000G1_scaffold_378_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15614..16237)
DNA (624bp) protein (208aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E354_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CCX83222.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ABC-type multidrug transport system, ATPase component
L1_007_000G1_scaffold_378_14
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16247..16939)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E4X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83226.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Protein of unknown function (DUF2705).
L1_007_000G1_scaffold_378_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16926..17681)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83228.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000G1_scaffold_378_16
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17668..18429)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6G9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15214.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000G1_scaffold_378_17
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18687..20408)
DNA (1722bp) protein (574aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=2 Tax=root RepID=D4L6G7_9FIRM
L1_007_000G1_scaffold_378_18
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20645..21769
DNA (1125bp) protein (375aa)
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
Glycerol dehydrogenase and related enzymes {ECO:0000313|EMBL:CBL15211.1}; EC=1.1.1.6 {ECO:0000313|EMBL:CBL15211.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Glycerol dehydrogenase and related enzymes n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6G6_9FIRM
L1_007_000G1_scaffold_378_19
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22065..23435)
DNA (1371bp) protein (457aa)
Na+/H+-dicarboxylate symporters n=2 Tax=root RepID=D4L6G5_9FIRM
Na+/H+-dicarboxylate symporters
Na+/H+-dicarboxylate symporters {ECO:0000313|EMBL:CBL15210.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000G1_scaffold_378_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23839..24591)
DNA (753bp) protein (251aa)
Transcriptional regulators of sugar metabolism n=2 Tax=root RepID=R5E393_9FIRM
Transcriptional regulators of sugar metabolism {ECO:0000313|EMBL:CCX83252.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Transcriptional regulators of sugar metabolism
L1_007_000G1_scaffold_378_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24733..25725)
DNA (993bp) protein (331aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DST5_9FIRM
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) {ECO:0000313|EMBL:CCX83253.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L1_007_000G1_scaffold_378_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25817..26788)
DNA (972bp) protein (324aa)
Sugar kinases, ribokinase family n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6G2_9FIRM
Sugar kinases, ribokinase family
Sugar kinases ribokinase family {ECO:0000313|EMBL:CCX83254.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000G1_scaffold_378_23
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26790..27629)
DNA (840bp) protein (280aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CBL15206.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBL15206.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Fructose-bisphosphate aldolase n=3 Tax=root RepID=D4L6G1_9FIRM
L1_007_000G1_scaffold_378_24
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27675..28730)
DNA (1056bp) protein (352aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6G0_9FIRM
Threonine dehydrogenase and related Zn-dependent dehydrogenases
Threonine dehydrogenase and related Zn-dependent dehydrogenases {ECO:0000313|EMBL:CBL15205.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000G1_scaffold_378_25
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28987..30375)
DNA (1389bp) protein (463aa)
Sugar phosphate permease n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E3A2_9FIRM
Sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:CCX83262.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000G1_scaffold_378_26
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30418..31119)
DNA (702bp) protein (234aa)
Pentose-5-phosphate-3-epimerase n=3 Tax=root RepID=D4L6F8_9FIRM
Pentose-5-phosphate-3-epimerase
Pentose-5-phosphate-3-epimerase {ECO:0000313|EMBL:CCX83265.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000G1_scaffold_378_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31153..32253)
DNA (1101bp) protein (367aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases n=2 Tax=Ruminococcus RepID=D4L6F7_9FIRM
Threonine dehydrogenase and related Zn-dependent dehydrogenases
Threonine dehydrogenase and related Zn-dependent dehydrogenases {ECO:0000313|EMBL:CBL15202.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000G1_scaffold_378_28
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(32910..35603)
DNA (2694bp) protein (898aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E523_9FIRM
L1_007_000G1_scaffold_378_29
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35812..36189
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6F5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15200.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000G1_scaffold_378_30
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36314..36652)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5DSN7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15199.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Displaying items 1-30 of 101 in total

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