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L1_007_000G1_scaffold_391

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_391_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

168..863
DNA (696bp) protein (232aa)
NADH dehydrogenase n=7 Tax=Lactobacillus rhamnosus RepID=C7TF10_LACRG
ndh; NADH dehydrogenase
NADH dehydrogenase in cluster with putative pheromone {ECO:0000313|EMBL:AGP74985.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_000G1_scaffold_391_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1036..1479
DNA (444bp) protein (148aa)
Conserved protein n=8 Tax=Lactobacillus rhamnosus RepID=C7TF11_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR88204.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI42747.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L1_007_000G1_scaffold_391_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1476..2063
DNA (588bp) protein (196aa)
Predicted membrane protein n=12 Tax=Lactobacillus rhamnosus RepID=B5QNY7_LACRH
heptaprenyl diphosphate synthase component I family protein
Heptaprenyl diphosphate synthase {ECO:0000313|EMBL:KIC97247.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_000G1_scaffold_391_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2038..3015
DNA (978bp) protein (326aa)
Geranylgeranyl pyrophosphate synthase n=4 Tax=Lactobacillus rhamnosus RepID=C7T6L9_LACRG
ispB; Geranylgeranyl pyrophosphate synthase
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:BAI42749.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L1_007_000G1_scaffold_391_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3460..3957
DNA (498bp) protein (166aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TLQ8_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74989.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_000G1_scaffold_391_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4108..4899
DNA (792bp) protein (264aa)
Metallophosphoesterase n=3 Tax=Lactobacillus rhamnosus RepID=C7TLQ9_LACRL
calcineurin-like phosphoesterase family protein
Metallophosphoesterase {ECO:0000313|EMBL:KIC97250.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_000G1_scaffold_391_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5341..5901)
DNA (561bp) protein (187aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TLR1_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74992.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_000G1_scaffold_391_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6146..7030
DNA (885bp) protein (295aa)
Transcriptional regulator, xre family n=5 Tax=Lactobacillus rhamnosus RepID=C7TLR2_LACRL
XRE family transcriptional regulator
Transcriptional activator, Rgg/GadR/MutR family domain protein {ECO:0000313|EMBL:EEN79733.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_000G1_scaffold_391_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7578..8453)
DNA (876bp) protein (292aa)
ABC transporter, ATPase component n=5 Tax=Lactobacillus rhamnosus RepID=C7TLR4_LACRL
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEN79731.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_000G1_scaffold_391_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8447..9685)
DNA (1239bp) protein (413aa)
Conserved protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TLR5_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74997.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_000G1_scaffold_391_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9675..10790)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=5 Tax=Lactobacillus rhamnosus RepID=S5A789_LACRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC97257.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_000G1_scaffold_391_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11302..11985)
DNA (684bp) protein (228aa)
NADP oxidoreductase coenzyme F420-dependent family protein n=3 Tax=Lactobacillus rhamnosus RepID=G7UXY4_LACRH
NADP oxidoreductase coenzyme F420-dependent family protein
Putative dinucleotide-binding enzyme {ECO:0000313|EMBL:AGP75000.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_000G1_scaffold_391_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11985..13040)
DNA (1056bp) protein (352aa)
Oxidoreductase, LLM family {ECO:0000313|EMBL:EEN79726.1}; EC=1.-.-.- {ECO:0000313|EMBL:EEN79726.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Monooxygenase n=4 Tax=Lactobacillus rhamnosus RepID=G7UXY5_LACRH
monooxygenase
L1_007_000G1_scaffold_391_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13269..13808)
DNA (540bp) protein (180aa)
PIN domain containing protein n=9 Tax=Lactobacillus rhamnosus RepID=B5QNX2_LACRH
hypothetical protein
DNA-binding protein {ECO:0000313|EMBL:KIC97260.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_000G1_scaffold_391_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13809..14591)
DNA (783bp) protein (261aa)
TrmH family tRNA/rRNA methyltransferase YacO {ECO:0000313|EMBL:EKS50477.1}; EC=2.1.1.- {ECO:0000313|EMBL:EKS50477.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
RNA methyltransferase, TrmH family, group 3 n=7 Tax=Lactobacillus rhamnosus RepID=C7TLS2_LACRL
rlmB; TrmH family group 3 RNA methyltransferase
L1_007_000G1_scaffold_391_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14563..14991)
DNA (429bp) protein (143aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Mini-ribonuclease 3 n=5 Tax=Lactobacillus rhamnosus RepID=C7TLS3_LACRL
RNase3 domain-containing protein
L1_007_000G1_scaffold_391_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14988..16394)
DNA (1407bp) protein (469aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteine--tRNA ligase; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Cysteine--tRNA ligase n=5 Tax=Lactobacillus rhamnosus RepID=C7TLS4_LACRL
cysS; cysteine--tRNA ligase
L1_007_000G1_scaffold_391_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16531..17925)
DNA (1395bp) protein (465aa)
(S)-2-hydroxy-acid oxidase chain D (EC 1.1.3.15) n=5 Tax=Lactobacillus rhamnosus RepID=C7TLS5_LACRL
FAD linked oxidase, C-terminal domain-containing protein
FAD-binding protein {ECO:0000313|EMBL:KIC96853.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L1_007_000G1_scaffold_391_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18048..18617)
DNA (570bp) protein (190aa)
Conserved protein n=1 Tax=Lactobacillus rhamnosus (strain Lc 705) RepID=C7TLS6_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN79720.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_000G1_scaffold_391_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18893..19003)
DNA (111bp) protein (37aa)
Conserved protein n=2 Tax=Lactobacillus rhamnosus RepID=C7TLS7_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN79719.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_000G1_scaffold_391_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19250..20743)
DNA (1494bp) protein (498aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Glutamate--tRNA ligase n=9 Tax=Lactobacillus rhamnosus RepID=B5QNW3_LACRH
gltX; glutamate--tRNA ligase
L1_007_000G1_scaffold_391_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21294..22124)
DNA (831bp) protein (277aa)
Conserved membrane protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TLS9_LACRL
membrane protein
Putative membrane protein {ECO:0000313|EMBL:AGP75009.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_000G1_scaffold_391_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22138..23154)
DNA (1017bp) protein (339aa)
Conserved membrane protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TLT0_LACRL
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75010.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_000G1_scaffold_391_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23151..23537)
DNA (387bp) protein (129aa)
Predicted transcriptional regulator n=9 Tax=Lactobacillus rhamnosus RepID=B5QNV9_LACRH
bacterial regulatory s, gntR family protein
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AGP75011.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_000G1_scaffold_391_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23669..25297)
DNA (1629bp) protein (543aa)
ABC transporter, multidrug transporter ATPase and permease component n=4 Tax=Lactobacillus rhamnosus RepID=C7TLT2_LACRL
Phospholipid-lipopolysaccharide ABC transporter {ECO:0000313|EMBL:AGP75012.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
multidrug ABC transporter ATPase and permease
L1_007_000G1_scaffold_391_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25797..27113)
DNA (1317bp) protein (439aa)
Internalin J n=5 Tax=Lactobacillus rhamnosus RepID=C7TLT3_LACRL
LPXTG-motif cell wall anchor domain-containing protein
Cell wall surface anchor family protein {ECO:0000313|EMBL:AGP75013.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_000G1_scaffold_391_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27398..28156)
DNA (759bp) protein (253aa)
ABC transporter, permease protein n=7 Tax=Lactobacillus rhamnosus RepID=C7TLT4_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP75014.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_000G1_scaffold_391_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28158..29063)
DNA (906bp) protein (302aa)
ABC transporter, ATPase component n=8 Tax=Lactobacillus rhamnosus RepID=C7TLT5_LACRL
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEN79710.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L1_007_000G1_scaffold_391_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29205..30101
DNA (897bp) protein (299aa)
Transcriptional regulator, xre family n=8 Tax=Lactobacillus rhamnosus RepID=C7TLT6_LACRL
transcriptional activator, Rgg/GadR/MutR family, C-terminal domain protein
Positive transcriptional regulator MutR family {ECO:0000313|EMBL:AGP75016.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L1_007_000G1_scaffold_391_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30193..31308)
DNA (1116bp) protein (372aa)
Integral membrane protein, PIN and TRAM domains n=8 Tax=Lactobacillus rhamnosus RepID=B5QNV7_LACRH
hypothetical protein
PIN/TRAM domain protein, Pili retraction protein pilT {ECO:0000313|EMBL:CAR88234.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI42777.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Displaying items 1-30 of 81 in total

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