ggKbase home page

L1_007_000G1_scaffold_415

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_415_1
unknown

Not on your lists

3..134
DNA (132bp) protein (44aa)

This feature has no annotations

L1_007_000G1_scaffold_415_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(123..761)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NI93_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35994.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_000G1_scaffold_415_3
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(844..2157)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NI94_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05842.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
PucR family transcriptional regulator
L1_007_000G1_scaffold_415_4
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2219..3487)
DNA (1269bp) protein (423aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BIY3_9CLOT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERI71753.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L1_007_000G1_scaffold_415_5
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3522..6875)
DNA (3354bp) protein (1118aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FIT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00702.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
two-component system sensor histidine kinase
L1_007_000G1_scaffold_415_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6872..8149)
DNA (1278bp) protein (426aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57869.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC-type sugar transport system, periplasmic component
L1_007_000G1_scaffold_415_7
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8355..9161
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000367BEA6
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEG56471.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
beta-lactamase superfamily metal-dependent hydrolase
L1_007_000G1_scaffold_415_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9158..9730)
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NI97_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35996.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted metal-dependent hydrolase
L1_007_000G1_scaffold_415_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9740..10561)
DNA (822bp) protein (274aa)
ABC transporter, permease protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NI98_CLOSV
ABC transporter, permease protein {ECO:0000313|EMBL:EDS05846.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
sugar transporter permease
L1_007_000G1_scaffold_415_10
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10571..11458)
DNA (888bp) protein (296aa)
Transmembrane permease MsmF n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NI99_CLOSV
Transmembrane permease MsmF {ECO:0000313|EMBL:EDS05847.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC-type transport system, sugar-familypermease
L1_007_000G1_scaffold_415_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11517..12818)
DNA (1302bp) protein (434aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35999.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
sugar transporter, substrate-binding lipoprotein
L1_007_000G1_scaffold_415_12
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12967..14613)
DNA (1647bp) protein (549aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Hydroxylamine reductase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NIA1_CLOSV
hypothetical protein
L1_007_000G1_scaffold_415_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14716..15390)
DNA (675bp) protein (225aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Clostridiales RepID=B0NIA2_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36001.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Crp/Fnr family transcriptional regulator
L1_007_000G1_scaffold_415_14
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15387..16457)
DNA (1071bp) protein (357aa)
Methyltransferase, MtaA/CmuA family n=2 Tax=Clostridiales RepID=B0NIA3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN36002.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Uroporphyrinogen decarboxylase (URO-D)
L1_007_000G1_scaffold_415_15
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16454..16630)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XU80_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ89176.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
hypothetical protein
L1_007_000G1_scaffold_415_16
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16790..17989)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XP44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08047.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L1_007_000G1_scaffold_415_17
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18012..18983)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WAI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08048.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
esterase/lipase
L1_007_000G1_scaffold_415_18
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18985..19953)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WMD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08049.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
rbsC1; ribose transport system permease RbsC
L1_007_000G1_scaffold_415_19
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19966..21450)
DNA (1485bp) protein (495aa)
ribose import ATP-binding protein RbsA (EC:3.6.3.17)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WF91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08050.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L1_007_000G1_scaffold_415_20
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21537..22529)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WVK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08051.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
putative monosaccharide-transporting ATPase
L1_007_000G1_scaffold_415_21
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22623..24086)
DNA (1464bp) protein (488aa)
ribose transport ATP-binding protein RbsA (EC:3.6.3.17)
ABC-type sugar transport system ATPase component-like protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XP46_9FIRM
ABC-type sugar transport system ATPase component-like protein {ECO:0000313|EMBL:CDD08052.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L1_007_000G1_scaffold_415_22
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24083..25108)
DNA (1026bp) protein (342aa)
Signal transduction histidine kinase LytS n=1 Tax=Dorea sp. CAG:317 RepID=R6WAJ0_9FIRM
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:CDD08053.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
integral membrane sensor signal transduction histidine kinase
L1_007_000G1_scaffold_415_23
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25119..26732)
DNA (1614bp) protein (538aa)
Two component transcriptional regulator AraC family n=1 Tax=Dorea sp. CAG:317 RepID=R6WME4_9FIRM
Two component transcriptional regulator AraC family {ECO:0000313|EMBL:CDD08054.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
AraC family transcriptional regulator
L1_007_000G1_scaffold_415_24
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27053..29635
DNA (2583bp) protein (861aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75475.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L1_007_000G1_scaffold_415_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29819..33625
DNA (3807bp) protein (1269aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61781.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
histidine kinase
L1_007_000G1_scaffold_415_26
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33801..35306
DNA (1506bp) protein (502aa)
Catalase {ECO:0000313|EMBL:EEG72394.1}; EC=1.11.1.6 {ECO:0000313|EMBL:EEG72394.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Catalase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5L0_9CLOT
catalase
L1_007_000G1_scaffold_415_27
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35434..36051
DNA (618bp) protein (206aa)
TrkA C-terminal domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5K9_9CLOT
TrkA C-terminal domain protein {ECO:0000313|EMBL:EEG72393.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
fused transcriptional regulator, GntR family/TrkA-C domain-containing protein
L1_007_000G1_scaffold_415_28
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36093..37952
DNA (1860bp) protein (620aa)
ABC transporter, substrate-binding protein, QAT family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5K8_9CLOT
ABC transporter, substrate-binding protein, QAT family {ECO:0000313|EMBL:EEG72392.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
ABC transporter permease
L1_007_000G1_scaffold_415_29
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37971..39152
DNA (1182bp) protein (394aa)
opuAA; Glycine betaine transport ATP-binding protein OpuAA (EC:3.6.3.32)
Glycine betaine/L-proline transport ATP binding subunit n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5K7_9CLOT
Glycine betaine/L-proline transport ATP binding subunit {ECO:0000313|EMBL:EEG72391.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L1_007_000G1_scaffold_415_30
Listeriaceae bacterium FSL A5-0209, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

39279..40148
DNA (870bp) protein (290aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1497679 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae.;" source="Listeriaceae bacterium FSL A5-0209.;"
shikimate dehydrogenase (EC:1.1.1.282)
shikimate 5-dehydrogenase n=1 Tax=Sporolactobacillus vineae RepID=UPI000287E5D2
Displaying items 1-30 of 64 in total

View Taxonomy