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L1_007_000G1_scaffold_428

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_428_1
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(118..705)
DNA (588bp) protein (196aa)
30S ribosomal protein S4 n=4 Tax=Megasphaera RepID=G0VP38_MEGEL
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000313|EMBL:CCC73216.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000G1_scaffold_428_2
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

991..1587
DNA (597bp) protein (199aa)
Nitroreductase n=2 Tax=Megasphaera RepID=S7HMW7_9FIRM
nitroreductase
Nitroreductase {ECO:0000313|EMBL:CCC73215.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000G1_scaffold_428_3
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1669..1941)
DNA (273bp) protein (91aa)
Acetyltransferase n=2 Tax=Megasphaera RepID=S7HN78_9FIRM
Acetyltransferase {ECO:0000313|EMBL:EPP18252.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
acetyltransferase
L1_007_000G1_scaffold_428_4
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1983..2564)
DNA (582bp) protein (194aa)
Phosphoglycerate mutase family protein n=2 Tax=Megasphaera RepID=S7HMZ6_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EPP18251.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
phosphoglycerate mutase family protein
L1_007_000G1_scaffold_428_5
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2736..6266)
DNA (3531bp) protein (1177aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159, ECO:0000313|EMBL:CCC73209.1}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VP31_MEGEL
pyruvate-flavodoxin oxidoreductase
L1_007_000G1_scaffold_428_6
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6594..7760)
DNA (1167bp) protein (389aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MTJ4_9FIRM
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:CDF04499.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
cyclopropane-fatty-acyl-phospholipid synthase
L1_007_000G1_scaffold_428_7
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7778..8629)
DNA (852bp) protein (284aa)
Bifunctional protein FolD n=2 Tax=Megasphaera RepID=S7HN73_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
bifunctional protein FolD
L1_007_000G1_scaffold_428_8
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8668..10656)
DNA (1989bp) protein (663aa)
Penicillin binding protein transpeptidase domain protein n=2 Tax=Megasphaera RepID=S7HMZ0_9FIRM
Penicillin binding protein transpeptidase domain protein {ECO:0000313|EMBL:EPP18246.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
penicillin binding protein transpeptidase domain protein
L1_007_000G1_scaffold_428_9
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10631..12061)
DNA (1431bp) protein (477aa)
HD domain protein n=2 Tax=Megasphaera RepID=S7IZE9_9FIRM
HD domain protein {ECO:0000313|EMBL:EPP18245.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
HD domain protein
L1_007_000G1_scaffold_428_10
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12217..12744
DNA (528bp) protein (176aa)
Cob(I)yrinic acid a n=2 Tax=Megasphaera RepID=S7HRB3_9FIRM
Cob(I)yrinic acid a {ECO:0000313|EMBL:EPP18244.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
cob(I)yrinic acid a
L1_007_000G1_scaffold_428_11
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12764..14023
DNA (1260bp) protein (420aa)
Peptidase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VP25_MEGEL
peptidase
Peptidase {ECO:0000313|EMBL:CCC73203.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000G1_scaffold_428_12
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14050..14718)
DNA (669bp) protein (223aa)
HAD-superfamily hydrolase n=2 Tax=Megasphaera RepID=S7HGS6_9FIRM
HAD-superfamily hydrolase {ECO:0000313|EMBL:EPP14729.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
HAD-superfamily hydrolase
L1_007_000G1_scaffold_428_13
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14958..16133
DNA (1176bp) protein (392aa)
Cation diffusion facilitator family transporter n=2 Tax=Megasphaera RepID=S7HIH6_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EPP14731.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
cation diffusion facilitator family transporter
L1_007_000G1_scaffold_428_14
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16168..19653)
DNA (3486bp) protein (1162aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
DNA polymerase III DnaE n=2 Tax=Megasphaera RepID=S7HGA5_9FIRM
DNA polymerase III
L1_007_000G1_scaffold_428_15
unknown

Not on your lists

comp(19796..20230)
DNA (435bp) protein (145aa)

This feature has no annotations

L1_007_000G1_scaffold_428_16
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20409..20819
DNA (411bp) protein (137aa)
ACT domain protein n=2 Tax=Megasphaera RepID=G0VP13_MEGEL
ACT domain protein
ACT domain protein {ECO:0000313|EMBL:CCC73191.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000G1_scaffold_428_17
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20866..21897)
DNA (1032bp) protein (344aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N1V0_9FIRM
phospho-2-dehydro-3-deoxyheptonate aldolase
L1_007_000G1_scaffold_428_18
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21969..23243)
DNA (1275bp) protein (425aa)
His Kinase A (Phosphoacceptor) domain-containing protein n=2 Tax=Megasphaera RepID=S7J5L9_9FIRM
His Kinase A (Phosphoacceptor) domain./Histidine kinase {ECO:0000313|EMBL:CDF06087.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
his Kinase A (Phosphoacceptor) domain./Histidine kinase-
L1_007_000G1_scaffold_428_19
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23248..23925)
DNA (678bp) protein (226aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N0H1_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDF06086.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_000G1_scaffold_428_20
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23938..24558)
DNA (621bp) protein (207aa)
RelA/SpoT domain protein n=2 Tax=Megasphaera RepID=S7HPB0_9FIRM
RelA/SpoT domain protein {ECO:0000313|EMBL:EPP14810.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
relA/SpoT domain protein
L1_007_000G1_scaffold_428_21
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24692..25327)
DNA (636bp) protein (212aa)
Redox-sensing transcriptional repressor Rex n=4 Tax=Megasphaera RepID=G0VP08_MEGEL
redox-sensing transcriptional repressor rex
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000G1_scaffold_428_22
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25417..26694)
DNA (1278bp) protein (426aa)
O-antigen polymerase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VP07_MEGEL
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:CCC73185.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000G1_scaffold_428_23
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26856..28160)
DNA (1305bp) protein (435aa)
Bifunctional protein FolC n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N1W6_9FIRM
Bifunctional protein FolC {ECO:0000313|EMBL:CDF06082.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
bifunctional protein FolC
L1_007_000G1_scaffold_428_24
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(28170..30830)
DNA (2661bp) protein (887aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Valine--tRNA ligase n=2 Tax=Megasphaera RepID=S7HH17_9FIRM
valyl-tRNA synthetase
L1_007_000G1_scaffold_428_25
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31148..31921)
DNA (774bp) protein (258aa)
Phenazine biosynthesis protein PhzF family protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VLL1_MEGEL
phenazine biosynthesis protein PhzF family protein
Phenazine biosynthesis protein PhzF family protein {ECO:0000313|EMBL:CCC74209.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000G1_scaffold_428_26
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32011..32250)
DNA (240bp) protein (80aa)
GntR family transcriptional regulator n=1 Tax=Bacillus sp. 37MA RepID=UPI00038061CE
ydeF; putative PLP-dependent transcriptional regulator YdeF
Putative PLP-dependent transcriptional regulator {ECO:0000313|EMBL:ELS62102.1}; TaxID=1236548 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis subsp. inaquosorum KCTC 13429.;"
L1_007_000G1_scaffold_428_27
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32355..32918)
DNA (564bp) protein (188aa)
Peroxiredoxin {ECO:0000313|EMBL:EEX69665.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EEX69665.1};; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKL5_9FIRM
L1_007_000G1_scaffold_428_28
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(33137..34489)
DNA (1353bp) protein (451aa)
HMGL-like protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VR43_MEGEL
HMGL-like protein
HMGL-like protein {ECO:0000313|EMBL:CCC72288.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_000G1_scaffold_428_29
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(34552..35607)
DNA (1056bp) protein (352aa)
Radical SAM protein n=2 Tax=Megasphaera RepID=S7HLF5_9FIRM
Radical SAM protein {ECO:0000313|EMBL:EPP17886.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
radical SAM protein
L1_007_000G1_scaffold_428_30
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(35660..36370)
DNA (711bp) protein (237aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Ribonuclease 3 n=2 Tax=Megasphaera RepID=G0VR45_MEGEL
ribonuclease 3
Displaying items 1-30 of 81 in total

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