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L1_007_000G1_scaffold_444

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000G1_scaffold_444_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(149..913)
DNA (765bp) protein (255aa)
Taurine import ATP-binding protein TauB n=1 Tax=Clostridium sp. D5 RepID=F0Z472_9CLOT
Taurine import ATP-binding protein TauB {ECO:0000313|EMBL:EGB91185.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter
L1_007_000G1_scaffold_444_2
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(910..1719)
DNA (810bp) protein (270aa)
Sulfonate ABC transporter, permease protein SsuC n=1 Tax=Clostridium sp. D5 RepID=F0Z471_9CLOT
Sulfonate ABC transporter, permease protein SsuC {ECO:0000313|EMBL:EGB91184.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_444_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1716..2741)
DNA (1026bp) protein (342aa)
Twin-arginine translocation pathway signal n=1 Tax=Clostridium sp. D5 RepID=F0Z470_9CLOT
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:EGB91183.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_444_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2777..3769)
DNA (993bp) protein (331aa)
Putative radical SAM domain protein n=1 Tax=Clostridium sp. D5 RepID=F0Z469_9CLOT
Putative radical SAM domain protein {ECO:0000313|EMBL:EGB91182.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_444_5
unknown

Not on your lists

comp(3996..4142)
DNA (147bp) protein (49aa)

This feature has no annotations

L1_007_000G1_scaffold_444_6
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4599..6329)
DNA (1731bp) protein (577aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EET8_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG30057.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000G1_scaffold_444_7
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6326..8116)
DNA (1791bp) protein (597aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J437_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28990.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_000G1_scaffold_444_8
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8274..8894)
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EET6_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEG30055.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
transcriptional regulator, TetR family
L1_007_000G1_scaffold_444_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9614..10858
DNA (1245bp) protein (415aa)
Related to HTH domain of SpoOJ/ParA/ParB/RepB family protein n=1 Tax=Clostridium sp. D5 RepID=F0Z457_9CLOT
Related to HTH domain of SpoOJ/ParA/ParB/RepB family protein {ECO:0000313|EMBL:EGB91170.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_444_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10906..11769
DNA (864bp) protein (288aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Clostridium sp. D5 RepID=F0Z456_9CLOT
L1_007_000G1_scaffold_444_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11978..13321)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32501.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Predicted ATPase (AAA+ superfamily)
L1_007_000G1_scaffold_444_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13735..14331)
DNA (597bp) protein (199aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. D5 RepID=F0Z2M8_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:EGB91703.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Mg-dependent DNase
L1_007_000G1_scaffold_444_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14547..15065)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z2M7_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91702.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_444_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15137..16003)
DNA (867bp) protein (289aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Putative pyridoxal kinase n=1 Tax=Clostridium sp. D5 RepID=F0Z2M6_9CLOT
L1_007_000G1_scaffold_444_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16337..17050)
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z2M5_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91700.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_444_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17098..17946)
DNA (849bp) protein (283aa)
Putative transcriptional regulator, RpiR family n=1 Tax=Clostridium sp. D5 RepID=F0Z2M4_9CLOT
Putative transcriptional regulator, RpiR family {ECO:0000313|EMBL:EGB91699.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
RpiR family transcriptional regulator
L1_007_000G1_scaffold_444_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18213..19067)
DNA (855bp) protein (285aa)
ketose-bisphosphate aldolases (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Clostridium sp. D5 RepID=F0Z2M3_9CLOT
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EGB91698.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_000G1_scaffold_444_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19092..20342)
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z2M2_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91697.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L1_007_000G1_scaffold_444_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20368..21228)
DNA (861bp) protein (287aa)
ketose-bisphosphate aldolase (EC:4.1.2.40)
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Clostridium sp. D5 RepID=F0Z2M1_9CLOT
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EGB91696.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_000G1_scaffold_444_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21277..22113)
DNA (837bp) protein (279aa)
Sugar ABC transporter, permease protein n=1 Tax=Clostridium sp. D5 RepID=F0Z2M0_9CLOT
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:EGB91695.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
binding-protein-dependent transport system inner membrane protein
L1_007_000G1_scaffold_444_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22117..22908)
DNA (792bp) protein (264aa)
Sugar ABC transporter permease n=1 Tax=Clostridium sp. D5 RepID=F0Z2L9_9CLOT
Sugar ABC transporter permease {ECO:0000313|EMBL:EGB91694.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
sugar ABC transporter permease
L1_007_000G1_scaffold_444_22
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23130..24449)
DNA (1320bp) protein (440aa)
Putative bacterial extracellular solute-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0Z2L8_9CLOT
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EGB91693.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
extracellular solute-binding protein
L1_007_000G1_scaffold_444_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24949..26757)
DNA (1809bp) protein (603aa)
beta-galactosidase (EC:3.2.1.23)
Glycosyl hydrolase, family 2 n=1 Tax=Clostridium sp. D5 RepID=F0Z2L6_9CLOT
Glycosyl hydrolase, family 2 {ECO:0000313|EMBL:EGB91691.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_000G1_scaffold_444_24
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26773..28818)
DNA (2046bp) protein (682aa)
Neopullulanase 1 (Alpha-amylase I) n=1 Tax=Clostridium sp. D5 RepID=F0Z2L5_9CLOT
Neopullulanase 1 (Alpha-amylase I) {ECO:0000313|EMBL:EGB91690.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
alpha amylase
L1_007_000G1_scaffold_444_25
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28878..30698)
DNA (1821bp) protein (607aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium sp. D5 RepID=F0Z2L4_9CLOT
ATP-dependent metalloprotease FtsH
L1_007_000G1_scaffold_444_26
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30715..31242)
DNA (528bp) protein (176aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0Z2L3_9CLOT
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EGB91688.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_000G1_scaffold_444_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31199..32626)
DNA (1428bp) protein (476aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Clostridium sp. D5 RepID=F0Z2L2_9CLOT
L1_007_000G1_scaffold_444_28
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33419..34819)
DNA (1401bp) protein (467aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Putative serine phosphatase RsbU, regulator of sigma subunit n=1 Tax=Clostridium sp. D5 RepID=F0Z2L1_9CLOT
Putative serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:EGB91686.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L1_007_000G1_scaffold_444_29
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35014..35352)
DNA (339bp) protein (113aa)
Putative cell-division initiation protein n=1 Tax=Clostridium sp. D5 RepID=F0Z2L0_9CLOT
Putative cell-division initiation protein {ECO:0000313|EMBL:EGB91685.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Septum formation initiator.
L1_007_000G1_scaffold_444_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35407..35736)
DNA (330bp) protein (110aa)
Spore cortex protein YabQ (Spore_YabQ) (Fragment) n=1 Tax=Clostridium sp. D5 RepID=F0Z2K8_9CLOT
Spore cortex protein YabQ (Spore_YabQ) {ECO:0000313|EMBL:EGB91683.1}; Flags: Fragment;; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Spore cortex protein YabQ (Spore_YabQ).
Displaying items 1-30 of 64 in total

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